F
French National Research Institute for Sustaina...

Projects with this topic

View VANA-Seq project

TRANSVIHMI / fernandez-nicolas / VANA-Seq

Illumina Next-Generat... Snakemake Conda FAIR Scalable wor... Short reads reports Unix Viruses TransVIHMI French Natio... SLURM vana

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Updated Jun 26, 2026

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Updated Jun 26, 2026
View WoNDER project

TRANSVIHMI / fernandez-nicolas / WoNDER

https://transvihmi.pages.ird.fr/nfernandez/WoNDER/

Snakemake Bash Next-Generat... Illumina Scalable wor... GNU/Linux Conda FAIR Genome assembly Short reads macOSX Quality Control Oxford Nanopore reports Git Unix Viruses TransVIHMI French Natio... ANRS AFROSCREEN

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Updated Jun 26, 2026

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Updated Jun 26, 2026
View GeVarLi project

TRANSVIHMI / fernandez-nicolas / GeVarLi
CI/CD Catalog (unpublished)

GeVarLi : GEnome assembly, VARiant calling and LIneage assignation. https://transvihmi.pages.ird.fr/nfernandez/GeVarLi/en

SARS-CoV-2 Genome assembly Variant calling Lineage assi... Nextclade Pangolin Next-Generat... Illumina Short reads Viruses Snakemake Scalable wor... macOSX TransVIHMI French Natio... ANRS AFROSCREEN GNU/Linux FAIR

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Updated Jun 22, 2026

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Updated Jun 22, 2026