Explore projects

Training on Unix Basics https://isi.pages.ird.fr/isi-formation-unix/

TSG-QC is a software for interactive analysis and validation of underway SST / SSS (Sea Surface Temperature and Sea Surface Salinity) measurements from a SeaBird Thermosalinograph (TSG). It has been developed under Matlab.

See https://marbec.pages.ird.fr/ob7/observe/observe-app/

A QGIS plugin to use deep learning features to create maps without needing a GPU or large datasets. iamap.readthedocs.io/en/latest/

Cruise Repository for Data Acquisition and Processing

GraTools is a powerful tool for analyzing and handling pangenome graphs quickly, whatever the model' and therefore the size and the complexity of the GFA file. It allows users to extract sequences or subgraphs, convert graphs into FASTA sequences, and identify shared and specific nodes across samples. Additionally, it provides essential statistics for chromosomes and samples data. With multi-threading support and flexible logging capabilities, Gratools is an efficient solution for pangenome graph analysis.

GeVarLi : GEnome assembly, VARiant calling and LIneage assignation. https://transvihmi.pages.ird.fr/nfernandez/GeVarLi/en

A, still very experimental, R package that acts as a storage location for functions and interfaces in connection with genomics (genomes, transcriptomes, annotation, phylogenomics, ...)

This is a place were sits everything that is needed to implement the xplain girst instance that gather our databases (images, widgets, etc...) appart of course from the girst files themselves that need to remain private.

Simple utility to download and process Sentinel-2 images