Explore projects

See https://marbec.pages.ird.fr/ob7/observe/observe-app/

A, still very experimental, R package that acts as a storage location for functions and interfaces in connection with genomics (genomes, transcriptomes, annotation, phylogenomics, ...)

Git : l'outil incontournable pour la gestion et le contrôle de version de vos fichiers https://isi.pages.ird.fr/isi-git-training-slides

Git : l'outil incontournable pour la gestion et le contrôle de version de vos fichiers https://isi.pages.ird.fr/isi-formation-git/

https://itrop.pages.ird.fr/itrop_bioinformatics/fr/index.html

GraTools is a powerful tool for analyzing and handling pangenome graphs quickly, whatever the model' and therefore the size and the complexity of the GFA file. It allows users to extract sequences or subgraphs, convert graphs into FASTA sequences, and identify shared and specific nodes across samples. Additionally, it provides essential statistics for chromosomes and samples data. With multi-threading support and flexible logging capabilities, Gratools is an efficient solution for pangenome graph analysis.

TSG-QC is a software for interactive analysis and validation of underway SST / SSS (Sea Surface Temperature and Sea Surface Salinity) measurements from a SeaBird Thermosalinograph (TSG). It has been developed under Matlab.

Site gathering training activities held by i-Trop https://itrop.pages.ird.fr/formations_itrop

Application of the FAO-56 formalism with used of remote-sensing daily NDVI forcing to estimate evapotranspiration and irrigation amounts at field scale . Main formalism is from SAMIR tool (CESBIO Lab).

LiDAR data voxelisation package

Simple utility to download and process Sentinel-2 images

Projet contenant les supports de communication du réseau ISI (logos, templates de formations)