Select Git revision
Search by author
- Any Author
- authors
-
alexis.dereeper_ird.fr alexis.dereeper_ird.fr
-
aurore.comte_ird.fr
aurore.comte_ird.fr
-
christine.tranchant_ird.fr
christine.tranchant_ird.fr
-
florian.charriat_cirad.fr florian.charriat_cirad.fr
-
julie.orjuela_ird.fr
julie.orjuela_ird.fr
-
sebastien.cunnac_ird.fr sebastien.cunnac_ird.fr
-
sebastien.ravel_cirad.fr
sebastien.ravel_cirad.fr
-
stephane.demita_inrae.fr stephane.demita_inrae.fr
-
theo.durand_cirad.fr theo.durand_cirad.fr
- Mar 22, 2024
-
-
julie.orjuela_ird.fr authored -
aurore.comte_ird.fr authoredadd control on module, remove PAIRED from config, correct some bug, one rule for hisat2_map See merge request !11
-
aurore.comte_ird.fr authored
-
- Mar 13, 2024
-
-
julie.orjuela_ird.fr authored
-
- Mar 12, 2024
-
-
aurore.comte_ird.fr authored
-
julie.orjuela_ird.fr authored
-
julie.orjuela_ird.fr authored
-
julie.orjuela_ird.fr authored
-
julie.orjuela_ird.fr authored
-
- Mar 08, 2024
-
-
julie.orjuela_ird.fr authored
-
julie.orjuela_ird.fr authored
-
julie.orjuela_ird.fr authored
-
aurore.comte_ird.fr authored
add image Closes #6 See merge request !10
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
add logo, change config file, modify multiqc rule See merge request !9
-
aurore.comte_ird.fr authored
-
- Feb 16, 2024
-
-
aurore.comte_ird.fr authored
the names of the output files for diffex contain now the name of the counting tool Closes #6 See merge request !8
-
aurore.comte_ird.fr authored
-
- Feb 15, 2024
-
-
aurore.comte_ird.fr authored
correct bug qui mettait une virgule à la fin de chaque ligne dans le fichier de comptage star_star Closes #6 See merge request !7
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
Resolve "add htseq-count as counter" Closes #5 See merge request !6
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
- Feb 14, 2024
-
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
Integration of STAR as mapper. Closes #4 See merge request !4
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-remove todo
-
aurore.comte_ird.fr authored
- modification of stringtie rules to use hisat2 output and star output - add in config file the possibility to use the pipeline in one shot or in comparison mode
-
- Feb 13, 2024
-
-
aurore.comte_ird.fr authored
-
- Feb 12, 2024
-
-
aurore.comte_ird.fr authored
- fastq.gz should be uncompressed for star - changer genomedir for star mapping
-
aurore.comte_ird.fr authored
- 1 rule index - 1 rule star_single - 1 rule star_paired add star in singularity
-
- Feb 09, 2024
-
-
aurore.comte_ird.fr authored
Resolve "manage single and paired" Closes #3 See merge request !3
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-
aurore.comte_ird.fr authored
-