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TRANSVIHMI
nfernandez
Reads_Quality_Control
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50e35980
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50e35980
authored
3 years ago
by
Nicolas FERNANDEZ NUÑEZ
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Update README.md (layout)
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@@ -96,7 +96,7 @@ For each genome you need to provide a database name (which **can't** contain spa
>The path to the index files **should include the basename** of the index, _(e.g: ./resources/databases//Human/Homo\_sapiens\_h38)_
>Thus, the index files _(Homo\_sapiens\_h38.bt2, Homo\_sapiens\_h38.2.bt2, etc.)_ are found in a folder named **'Homo\_sapiens\_h38'**
>For example, the Bowtie, Bowtie2 and BWA indices of a given genome reside in the **same folder**
>For example, the Bowtie, Bowtie2 and BWA indices of a given genome reside in the **same folder**
>A **single** path may be provided to **all** the of indices
The index used will be the one compatible with the chosen aligner _(as specified using the --aligner option)_
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