Explore projects

https://isi.pages.ird.fr/cop-gdrs/website/

See https://ultreiaio.gitlab.io/ird-observe

Shared pom

https://isi.pages.ird.fr/cop-gdrs/redcap-dataflow2

Install Conda using Miniforge3 script

Image analysis of microscope spore with YOLO

How to Fix Conda Licensing Issues https://mivegec.pages.ird.fr/dainat/malbec-fix-conda-licensing-issues/en/

An R package that implements a very limited client interface to the Grist API in the form of a set of functions interacting with a Grist database.

Material used to teach the R module at the 2024 session of the International Certificate in Bioinformatics and Genomics (CIBiG).

GraTools is a powerful tool for analyzing and handling pangenome graphs quickly, whatever the model' and therefore the size and the complexity of the GFA file. It allows users to extract sequences or subgraphs, convert graphs into FASTA sequences, and identify shared and specific nodes across samples. Additionally, it provides essential statistics for chromosomes and samples data. With multi-threading support and flexible logging capabilities, Gratools is an efficient solution for pangenome graph analysis.