Explore projects
-
-
Updated
-
Updated
-
Updated
-
A, still very experimental, R package that acts as a storage location for functions and interfaces in connection with genomics (genomes, transcriptomes, annotation, phylogenomics, ...)
Updated -
Updated
-
Long-read sequencing is a highly accurate approach that can be used to challenging genomes, such as those containing stretches of highly repetitive elements and lot of structural variant. Long read sequencing can also be used to generate de novo assembly and genome finishing applications Lot of tools are used to make genome assembly with long reads every day and sometimes you don't know wich Assembler tool is the best for your organism. PodiumASM is here for you ! PodiumASM is is an open-source, scalable, modulable and traceable snakemake pipeline, able to compare multiple long read assemblies obtained from multiple assemblers tools. The workflow PodiumASM can help you to choose the best assemblies among all possibilities.
Updated -
Updated
-
GeVarLi pipeline for AFROSCREEN ANRS
Updated -
Updated
-
Reads Quality Control (RQC) allow raw NGS reads quality control, before continue with more downstream analysis.
Updated -
AMAPVox, LiDAR data voxelisation software
Copyright (c) https://www.ird.fr (Institut de Recherche pour le Développement) 2016-2022
Updated -
Are you looking for a simplified installation process for your Snakemake workflows, including the various Python packages and the multitude of tools used by your pipelines?
Would you like to simplify the use of your workflows with user-friendly commands and subcommands that even non-bioinformatician users can easy use? Look no further - Snakecdysis is the solution for you!
Updated -
-
-
Updated
-
dojo snakemake assemblage long reads
Updated -