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# Advanced Spatial Analysis
## Data anonymization ("blurring")
`RGeoHealth` [@herbreteau:hal-01787435]
_quarto.yml
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......@@ -17,6 +17,7 @@ book:
- 03-vector_data.qmd
- 04-raster_data.qmd
- 05-mapping_with_r.qmd
- 06-advanced_spatial_analysis.qmd
- references.qmd
bibliography: references.bib
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<h1 class="quarto-secondary-nav-title"><span class="chapter-number">6</span>&nbsp; <span class="chapter-title">Advanced Spatial Analysis</span></h1>
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<a href="./01-introduction.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">1</span>&nbsp; <span class="chapter-title">Introduction</span></a>
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<li><a href="#data-anonymization-blurring" id="toc-data-anonymization-blurring" class="nav-link active" data-scroll-target="#data-anonymization-blurring"> <span class="header-section-number">6.1</span> Data anonymization (“blurring”)</a></li>
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<h2 data-number="6.1" class="anchored" data-anchor-id="data-anonymization-blurring"><span class="header-section-number">6.1</span> Data anonymization (“blurring”)</h2>
<p><code>RGeoHealth</code> <span class="citation" data-cites="herbreteau:hal-01787435">(<a href="references.html#ref-herbreteau:hal-01787435" role="doc-biblioref">Herbreteau, Révillion, and Trimaille 2018</a>)</span></p>
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<div id="ref-herbreteau:hal-01787435" class="csl-entry" role="doc-biblioentry">
Herbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018. <span>“<span class="nocase">GeoHealth and QuickOSM, two QGIS plugins for health applications</span>.”</span> In <em><span class="nocase">Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set</span></em>, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez Zribi, 1:257–86. QGIS and Generic Tools. <span>ISTE</span>. <a href="https://hal.archives-ouvertes.fr/hal-01787435">https://hal.archives-ouvertes.fr/hal-01787435</a>.
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......@@ -255,6 +260,14 @@ and Integrate Maps in Your r Workflow”</span> 1. <a href="https://doi.org/10.2
Gombin, Joel, and Paul-Antoine Chevalier. 2022. <span>“banR: R Client
for the BAN API.”</span>
</div>
<div id="ref-herbreteau:hal-01787435" class="csl-entry" role="doc-biblioentry">
Herbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018.
<span>“<span class="nocase">GeoHealth and QuickOSM, two QGIS plugins for
health applications</span>.”</span> In <em><span class="nocase">Earth
Systems - Environmental Sciences : QGIS in Remote Sensing
Set</span></em>, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez
Zribi, 1:257–86. QGIS and Generic Tools. <span>ISTE</span>. <a href="https://hal.archives-ouvertes.fr/hal-01787435">https://hal.archives-ouvertes.fr/hal-01787435</a>.
</div>
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Hijmans, Robert J. 2022a. <span>“Raster: Geographic Data Analysis and
Modeling.”</span> <a href="https://CRAN.R-project.org/package=raster">https://CRAN.R-project.org/package=raster</a>.
......@@ -274,6 +287,10 @@ Blog. <em>Carnet Néocartographique</em>. <a href="https://neocarto.hypotheses.o
Li, Xingong. 2009. <span>“Map Algebra and Beyond : 1. Map Algebra for
Scalar Fields.”</span> <a href="https://slideplayer.com/slide/5822638/" class="uri">https://slideplayer.com/slide/5822638/</a>.
</div>
<div id="ref-RGeoHealth" class="csl-entry" role="doc-biblioentry">
Longour, Lucas, Jeremy Commins, and Vincent Herbreteau. 2022.
<span>“RGeoHealth: RGeoHealth.”</span>
</div>
<div id="ref-MmadelinSIGR" class="csl-entry" role="doc-biblioentry">
Madelin, Malika. 2021. <span>“Analyse d’images Raster (Et
Télédétection).”</span> <a href="https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html" class="uri">https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html</a>.
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"text": "Agafonkin, Vladimir. 2015. “Leaflet Javascript Libary.”\n\n\nAppelhans, Tim, Florian Detsch, Christoph Reudenbach, and Stefan\nWoellauer. 2022. “Mapview: Interactive Viewing of Spatial Data in\nr.” https://CRAN.R-project.org/package=mapview.\n\n\nAppelhans, Tim, Kenton Russell, and Lorenzo Busetto. 2020.\n“Mapedit: Interactive Editing of Spatial Data in r.” https://CRAN.R-project.org/package=mapedit.\n\n\nBivand, Roger, Tim Keitt, and Barry Rowlingson. 2022. “Rgdal:\nBindings for the ’Geospatial’ Data Abstraction Library.” https://CRAN.R-project.org/package=rgdal.\n\n\nBivand, Roger, and Colin Rundel. 2021. “Rgeos: Interface to\nGeometry Engine - Open Source (’GEOS’).” https://CRAN.R-project.org/package=rgeos.\n\n\nBrunet, Roger, Robert Ferras, and Hervé Théry. 1993. 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"text": "Agafonkin, Vladimir. 2015. “Leaflet Javascript Libary.”\n\n\nAppelhans, Tim, Florian Detsch, Christoph Reudenbach, and Stefan\nWoellauer. 2022. “Mapview: Interactive Viewing of Spatial Data in\nr.” https://CRAN.R-project.org/package=mapview.\n\n\nAppelhans, Tim, Kenton Russell, and Lorenzo Busetto. 2020.\n“Mapedit: Interactive Editing of Spatial Data in r.” https://CRAN.R-project.org/package=mapedit.\n\n\nBivand, Roger, Tim Keitt, and Barry Rowlingson. 2022. “Rgdal:\nBindings for the ’Geospatial’ Data Abstraction Library.” https://CRAN.R-project.org/package=rgdal.\n\n\nBivand, Roger, and Colin Rundel. 2021. “Rgeos: Interface to\nGeometry Engine - Open Source (’GEOS’).” https://CRAN.R-project.org/package=rgeos.\n\n\nBrunet, Roger, Robert Ferras, and Hervé Théry. 1993. Les Mots de La\ngéographie: Dictionnaire Critique. 03) 911 BRU.\n\n\nCambon, Jesse, Diego Hernangómez, Christopher Belanger, and Daniel\nPossenriede. 2021. “Tidygeocoder: An r Package for\nGeocoding” 6: 3544. https://doi.org/10.21105/joss.03544.\n\n\nCauvin, Colette, Francisco Escobar, and Aziz Serradj. 2013. Thematic\nCartography, Cartography and the Impact of the Quantitative\nRevolution. Vol. 2. John Wiley & Sons.\n\n\nCheng, Joe, Bhaskar Karambelkar, and Yihui Xie. 2022. “Leaflet:\nCreate Interactive Web Maps with the JavaScript ’Leaflet’\nLibrary.” https://CRAN.R-project.org/package=leaflet.\n\n\nDorling, Daniel. 1996. Area Cartograms: Their Use and Creation,\nConcepts and Techniques in Modern Geography. Vol. 59. CATMOG:\nConcepts and Techniques in Modern Geography. Institute of British\nGeographers.\n\n\nDougenik, James A, Nicholas R Chrisman, and Duane R Niemeyer. 1985.\n“An Algorithm to Construct Continuous Area Cartograms.”\nThe Professional Geographer 37 (1): 75–81.\n\n\nDunnington, Dewey. 2021. “Ggspatial: Spatial Data Framework for\nGgplot2.” https://CRAN.R-project.org/package=ggspatial.\n\n\nGDAL/OGR contributors. n.d. GDAL/OGR Geospatial Data\nAbstraction Software Library. Open Source Geospatial Foundation. https://gdal.org.\n\n\nGilardi, Andrea, and Robin Lovelace. 2021. “Osmextract: Download\nand Import Open Street Map Data Extracts.” https://CRAN.R-project.org/package=osmextract.\n\n\nGiraud, Timothée. 2021a. “Linemap: Line Maps.” https://CRAN.R-project.org/package=linemap.\n\n\n———. 2021b. “Maptiles: Download and Display Map Tiles.” https://CRAN.R-project.org/package=maptiles.\n\n\n———. 2022a. “Mapsf: Thematic Cartography.” https://CRAN.R-project.org/package=mapsf.\n\n\n———. 2022b. “Tanaka: Design Shaded Contour Lines (or Tanaka)\nMaps.” https://CRAN.R-project.org/package=tanaka.\n\n\nGiraud, Timothée, and Nicolas Lambert. 2016. “Cartography: Create\nand Integrate Maps in Your r Workflow” 1. https://doi.org/10.21105/joss.00054.\n\n\nGombin, Joel, and Paul-Antoine Chevalier. 2022. “banR: R Client\nfor the BAN API.”\n\n\nHerbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018.\n“GeoHealth and QuickOSM, two QGIS plugins for\nhealth applications.” In Earth\nSystems - Environmental Sciences : QGIS in Remote Sensing\nSet, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez\nZribi, 1:257–86. QGIS and Generic Tools. ISTE. https://hal.archives-ouvertes.fr/hal-01787435.\n\n\nHijmans, Robert J. 2022a. “Raster: Geographic Data Analysis and\nModeling.” https://CRAN.R-project.org/package=raster.\n\n\n———. 2022b. “Terra: Spatial Data Analysis.” https://CRAN.R-project.org/package=terra.\n\n\nJeworutzki, Sebastian. 2020. “Cartogram: Create Cartograms with\nr.” https://CRAN.R-project.org/package=cartogram.\n\n\nLambert, Nicolas. 2015. “Les Anamorphoses Cartographiques.”\nBlog. Carnet Néocartographique. https://neocarto.hypotheses.org/366.\n\n\nLi, Xingong. 2009. “Map Algebra and Beyond : 1. Map Algebra for\nScalar Fields.” https://slideplayer.com/slide/5822638/.\n\n\nLongour, Lucas, Jeremy Commins, and Vincent Herbreteau. 2022.\n“RGeoHealth: RGeoHealth.”\n\n\nMadelin, Malika. 2021. “Analyse d’images Raster (Et\nTélédétection).” https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html.\n\n\nMennis, Jeremy. 2015. “Fundamentals of GIS : Raster\nOperations.” https://cupdf.com/document/gus-0262-fundamentals-of-gis-lecture-presentation-7-raster-operations-jeremy.html.\n\n\nNowosad, Jakub. 2021. “Image Processing and All Things\nRaster.” https://nowosad.github.io/SIGR2021/workshop2/workshop2.html.\n\n\nOlson, Judy M. 1976. “Noncontiguous Area Cartograms.”\nThe Professional Geographer 28 (4): 371–80.\n\n\nPadgham, Mark, Bob Rudis, Robin Lovelace, and Maëlle Salmon. 2017.\n“Osmdata” 2. https://doi.org/10.21105/joss.00305.\n\n\nPaull, John, and Benjamin Hennig. 2016. “Atlas of Organics: Four\nMaps of the World of Organic Agriculture.” Journal of\nOrganics 3 (1): 25–32.\n\n\nPebesma, Edzer. 2018b. “Simple Features for r:\nStandardized Support for Spatial Vector Data” 10. https://doi.org/10.32614/RJ-2018-009.\n\n\n———. 2018a. “Simple Features for R: Standardized Support for\nSpatial Vector Data.” The R Journal 10 (1): 439. https://doi.org/10.32614/rj-2018-009.\n\n\n———. 2021. “Stars: Spatiotemporal Arrays, Raster and Vector Data\nCubes.” https://CRAN.R-project.org/package=stars.\n\n\nPebesma, Edzer J., and Roger S. Bivand. 2005. “Classes and Methods\nfor Spatial Data in r” 5. https://CRAN.R-project.org/doc/Rnews/.\n\n\nPROJ contributors. 2021. PROJ Coordinate Transformation\nSoftware Library. Open Source Geospatial Foundation. https://proj.org/.\n\n\nRacine, Etienne B. 2016. “The Visual Raster Cheat Sheet.”\nhttps://rpubs.com/etiennebr/visualraster.\n\n\nTanaka, Kitiro. 1950. “The Relief Contour Method of Representing\nTopography on Maps.” Geographical Review 40 (3): 444. https://doi.org/10.2307/211219.\n\n\nTennekes, Martijn. 2018. “Tmap: Thematic\nMaps in r” 84. https://doi.org/10.18637/jss.v084.i06.\n\n\nTomlin, C. Dana. 1990. Geographic Information Systems and\nCartographic Modeling. Prentice Hall.\n\n\nWickham, Hadley. 2016. “Ggplot2: Elegant Graphics for Data\nAnalysis.” https://ggplot2.tidyverse.org."
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"text": "RGeoHealth (Herbreteau, Révillion, and Trimaille 2018)\n\n\n\n\nHerbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018. “GeoHealth and QuickOSM, two QGIS plugins for health applications.” In Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez Zribi, 1:257–86. QGIS and Generic Tools. ISTE. https://hal.archives-ouvertes.fr/hal-01787435."
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references.bib
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......@@ -379,4 +379,29 @@ Library},
publisher={Prentice Hall},
author={Tomlin, C. Dana},
year={1990}
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@incollection{herbreteau:hal-01787435,
TITLE = {{GeoHealth and QuickOSM, two QGIS plugins for health applications}},
AUTHOR = {Herbreteau, Vincent and R{\'e}villion, Christophe and Trimaille, Etienne},
URL = {https://hal.archives-ouvertes.fr/hal-01787435},
BOOKTITLE = {{Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set}},
EDITOR = {Nicolas Baghdadi and Cl{\'e}ment Mallet and Mehrez Zribi},
PUBLISHER = {{ISTE}},
SERIES = {QGIS and Generic Tools},
VOLUME = {1},
PAGES = {257-286},
YEAR = {2018},
MONTH = Jan,
KEYWORDS = {METHODOLOGIE ; LOGICIEL D'APPLICATION ; REPRESENTATION CARTOGRAPHIQUE ; SANTE ; SYSTEME D'INFORMATION GEOGRAPHIQUE ; ANALYSE SPATIALE},
PDF = {https://hal.archives-ouvertes.fr/hal-01787435/file/Herbreteau_Chapter7_GeoHealth_2018_author.pdf},
HAL_ID = {hal-01787435},
HAL_VERSION = {v1},
}
@article{RGeoHealth,
title = {RGeoHealth: RGeoHealth},
author = {Longour, Lucas and Commins, Jeremy and Herbreteau, Vincent},
year = {2022},
date = {2022}
}
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