From db32cf3d948c76df728bdafb86ed0d991fbad433 Mon Sep 17 00:00:00 2001
From: "lucas.longour_ird.fr" <lucas.longour@ird.fr>
Date: Fri, 23 Sep 2022 16:20:39 +0700
Subject: [PATCH] add chapter 6
---
06-advanced_spatial_analysis.qmd | 5 +
_quarto.yml | 1 +
public/06-advanced_spatial_analysis.html | 314 +++++++++++++++++++++++
public/references.html | 23 +-
public/search.json | 9 +-
references.bib | 27 +-
6 files changed, 374 insertions(+), 5 deletions(-)
create mode 100644 06-advanced_spatial_analysis.qmd
create mode 100644 public/06-advanced_spatial_analysis.html
diff --git a/06-advanced_spatial_analysis.qmd b/06-advanced_spatial_analysis.qmd
new file mode 100644
index 0000000..30cb003
--- /dev/null
+++ b/06-advanced_spatial_analysis.qmd
@@ -0,0 +1,5 @@
+# Advanced Spatial Analysis
+
+## Data anonymization ("blurring")
+
+`RGeoHealth` [@herbreteau:hal-01787435]
diff --git a/_quarto.yml b/_quarto.yml
index bc5ebbb..5ebf28b 100644
--- a/_quarto.yml
+++ b/_quarto.yml
@@ -17,6 +17,7 @@ book:
- 03-vector_data.qmd
- 04-raster_data.qmd
- 05-mapping_with_r.qmd
+ - 06-advanced_spatial_analysis.qmd
- references.qmd
bibliography: references.bib
diff --git a/public/06-advanced_spatial_analysis.html b/public/06-advanced_spatial_analysis.html
new file mode 100644
index 0000000..7495f50
--- /dev/null
+++ b/public/06-advanced_spatial_analysis.html
@@ -0,0 +1,314 @@
+<!DOCTYPE html>
+<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
+
+<meta charset="utf-8">
+<meta name="generator" content="quarto-0.9.617">
+
+<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
+
+
+<title>Mapping and spatial analyses in R for One Health studies - 6 Advanced Spatial Analysis</title>
+<style>
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+<script src="site_libs/quarto-search/quarto-search.js"></script>
+<meta name="quarto:offset" content="./">
+<link href="./references.html" rel="next">
+<link href="./05-mapping_with_r.html" rel="prev">
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+ "search-copy-link-title": "Copy link to search",
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+ "search-clear-button-title": "Clear",
+ "search-detached-cancel-button-title": "Cancel",
+ "search-submit-button-title": "Submit"
+ }
+}</script>
+
+
+<link rel="stylesheet" href="styles.css">
+</head>
+
+<body class="nav-sidebar floating">
+
+<div id="quarto-search-results"></div>
+ <header id="quarto-header" class="headroom fixed-top">
+ <nav class="quarto-secondary-nav" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
+ <div class="container-fluid d-flex justify-content-between">
+ <h1 class="quarto-secondary-nav-title"><span class="chapter-number">6</span> <span class="chapter-title">Advanced Spatial Analysis</span></h1>
+ <button type="button" class="quarto-btn-toggle btn" aria-label="Show secondary navigation">
+ <i class="bi bi-chevron-right"></i>
+ </button>
+ </div>
+ </nav>
+</header>
+<!-- content -->
+<div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-article">
+<!-- sidebar -->
+ <nav id="quarto-sidebar" class="sidebar collapse sidebar-navigation floating overflow-auto">
+ <div class="pt-lg-2 mt-2 text-left sidebar-header">
+ <div class="sidebar-title mb-0 py-0">
+ <a href="./">Mapping and spatial analyses in R for One Health studies</a>
+ <div class="sidebar-tools-main">
+ <a href="https://forge.ird.fr/espace-dev/personnels/longour/geohealth/documentation/rspatial-for-onehealth" title="Source Code" class="sidebar-tool px-1"><i class="bi bi-git"></i></a>
+</div>
+ </div>
+ </div>
+ <div class="mt-2 flex-shrink-0 align-items-center">
+ <div class="sidebar-search">
+ <div id="quarto-search" class="" title="Search"></div>
+ </div>
+ </div>
+ <div class="sidebar-menu-container">
+ <ul class="list-unstyled mt-1">
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./index.html" class="sidebar-item-text sidebar-link">Preface</a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./01-introduction.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">1</span> <span class="chapter-title">Introduction</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./02-data_acquisition.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">2</span> <span class="chapter-title">Data Acquisition</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./03-vector_data.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">3</span> <span class="chapter-title">Vector Data</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./04-raster_data.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">4</span> <span class="chapter-title">Work with Raster Data</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./05-mapping_with_r.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">5</span> <span class="chapter-title">Mapping With R</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./06-advanced_spatial_analysis.html" class="sidebar-item-text sidebar-link active"><span class="chapter-number">6</span> <span class="chapter-title">Advanced Spatial Analysis</span></a>
+ </div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./references.html" class="sidebar-item-text sidebar-link">References</a>
+ </div>
+</li>
+ </ul>
+ </div>
+</nav>
+<!-- margin-sidebar -->
+ <div id="quarto-margin-sidebar" class="sidebar margin-sidebar">
+ <nav id="TOC" role="doc-toc">
+ <h2 id="toc-title">Table of contents</h2>
+
+ <ul>
+ <li><a href="#data-anonymization-blurring" id="toc-data-anonymization-blurring" class="nav-link active" data-scroll-target="#data-anonymization-blurring"> <span class="header-section-number">6.1</span> Data anonymization (“blurringâ€)</a></li>
+ </ul>
+</nav>
+ </div>
+<!-- main -->
+<main class="content" id="quarto-document-content">
+
+<header id="title-block-header" class="quarto-title-block default">
+<div class="quarto-title">
+<h1 class="title d-none d-lg-block"><span class="chapter-number">6</span> <span class="chapter-title">Advanced Spatial Analysis</span></h1>
+</div>
+
+
+
+<div class="quarto-title-meta">
+
+
+
+ </div>
+
+
+</header>
+
+<section id="data-anonymization-blurring" class="level2" data-number="6.1">
+<h2 data-number="6.1" class="anchored" data-anchor-id="data-anonymization-blurring"><span class="header-section-number">6.1</span> Data anonymization (“blurringâ€)</h2>
+<p><code>RGeoHealth</code> <span class="citation" data-cites="herbreteau:hal-01787435">(<a href="references.html#ref-herbreteau:hal-01787435" role="doc-biblioref">Herbreteau, Révillion, and Trimaille 2018</a>)</span></p>
+
+
+<div id="refs" class="references csl-bib-body hanging-indent" role="doc-bibliography" style="display: none">
+<div id="ref-herbreteau:hal-01787435" class="csl-entry" role="doc-biblioentry">
+Herbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018. <span>“<span class="nocase">GeoHealth and QuickOSM, two QGIS plugins for health applications</span>.â€</span> In <em><span class="nocase">Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set</span></em>, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez Zribi, 1:257–86. QGIS and Generic Tools. <span>ISTE</span>. <a href="https://hal.archives-ouvertes.fr/hal-01787435">https://hal.archives-ouvertes.fr/hal-01787435</a>.
+</div>
+</div>
+</section>
+
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+ <a href="./05-mapping_with_r.html" class="pagination-link">
+ <i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">5</span> <span class="chapter-title">Mapping With R</span></span>
+ </a>
+ </div>
+ <div class="nav-page nav-page-next">
+ <a href="./references.html" class="pagination-link">
+ <span class="nav-page-text">References</span> <i class="bi bi-arrow-right-short"></i>
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diff --git a/public/references.html b/public/references.html
index 8d7384c..1e3af1c 100644
--- a/public/references.html
+++ b/public/references.html
@@ -44,7 +44,7 @@ div.csl-indent {
<script src="site_libs/quarto-search/fuse.min.js"></script>
<script src="site_libs/quarto-search/quarto-search.js"></script>
<meta name="quarto:offset" content="./">
-<link href="./05-mapping_with_r.html" rel="prev">
+<link href="./06-advanced_spatial_analysis.html" rel="prev">
<script src="site_libs/quarto-html/quarto.js"></script>
<script src="site_libs/quarto-html/popper.min.js"></script>
<script src="site_libs/quarto-html/tippy.umd.min.js"></script>
@@ -139,6 +139,11 @@ div.csl-indent {
<div class="sidebar-item-container">
<a href="./05-mapping_with_r.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">5</span> <span class="chapter-title">Mapping With R</span></a>
</div>
+</li>
+ <li class="sidebar-item">
+ <div class="sidebar-item-container">
+ <a href="./06-advanced_spatial_analysis.html" class="sidebar-item-text sidebar-link"><span class="chapter-number">6</span> <span class="chapter-title">Advanced Spatial Analysis</span></a>
+ </div>
</li>
<li class="sidebar-item">
<div class="sidebar-item-container">
@@ -255,6 +260,14 @@ and Integrate Maps in Your r Workflowâ€</span> 1. <a href="https://doi.org/10.2
Gombin, Joel, and Paul-Antoine Chevalier. 2022. <span>“banR: R Client
for the BAN API.â€</span>
</div>
+<div id="ref-herbreteau:hal-01787435" class="csl-entry" role="doc-biblioentry">
+Herbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018.
+<span>“<span class="nocase">GeoHealth and QuickOSM, two QGIS plugins for
+health applications</span>.â€</span> In <em><span class="nocase">Earth
+Systems - Environmental Sciences : QGIS in Remote Sensing
+Set</span></em>, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez
+Zribi, 1:257–86. QGIS and Generic Tools. <span>ISTE</span>. <a href="https://hal.archives-ouvertes.fr/hal-01787435">https://hal.archives-ouvertes.fr/hal-01787435</a>.
+</div>
<div id="ref-raster" class="csl-entry" role="doc-biblioentry">
Hijmans, Robert J. 2022a. <span>“Raster: Geographic Data Analysis and
Modeling.â€</span> <a href="https://CRAN.R-project.org/package=raster">https://CRAN.R-project.org/package=raster</a>.
@@ -274,6 +287,10 @@ Blog. <em>Carnet Néocartographique</em>. <a href="https://neocarto.hypotheses.o
Li, Xingong. 2009. <span>“Map Algebra and Beyond : 1. Map Algebra for
Scalar Fields.â€</span> <a href="https://slideplayer.com/slide/5822638/" class="uri">https://slideplayer.com/slide/5822638/</a>.
</div>
+<div id="ref-RGeoHealth" class="csl-entry" role="doc-biblioentry">
+Longour, Lucas, Jeremy Commins, and Vincent Herbreteau. 2022.
+<span>“RGeoHealth: RGeoHealth.â€</span>
+</div>
<div id="ref-MmadelinSIGR" class="csl-entry" role="doc-biblioentry">
Madelin, Malika. 2021. <span>“Analyse d’images Raster (Et
Télédétection).â€</span> <a href="https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html" class="uri">https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html</a>.
@@ -439,8 +456,8 @@ window.document.addEventListener("DOMContentLoaded", function (event) {
</script>
<nav class="page-navigation">
<div class="nav-page nav-page-previous">
- <a href="./05-mapping_with_r.html" class="pagination-link">
- <i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">5</span> <span class="chapter-title">Mapping With R</span></span>
+ <a href="./06-advanced_spatial_analysis.html" class="pagination-link">
+ <i class="bi bi-arrow-left-short"></i> <span class="nav-page-text"><span class="chapter-number">6</span> <span class="chapter-title">Advanced Spatial Analysis</span></span>
</a>
</div>
<div class="nav-page nav-page-next">
diff --git a/public/search.json b/public/search.json
index 9a8036b..477f995 100644
--- a/public/search.json
+++ b/public/search.json
@@ -200,6 +200,13 @@
"href": "references.html",
"title": "References",
"section": "",
- "text": "Agafonkin, Vladimir. 2015. “Leaflet Javascript Libary.â€\n\n\nAppelhans, Tim, Florian Detsch, Christoph Reudenbach, and Stefan\nWoellauer. 2022. “Mapview: Interactive Viewing of Spatial Data in\nr.†https://CRAN.R-project.org/package=mapview.\n\n\nAppelhans, Tim, Kenton Russell, and Lorenzo Busetto. 2020.\n“Mapedit: Interactive Editing of Spatial Data in r.†https://CRAN.R-project.org/package=mapedit.\n\n\nBivand, Roger, Tim Keitt, and Barry Rowlingson. 2022. “Rgdal:\nBindings for the ’Geospatial’ Data Abstraction Library.†https://CRAN.R-project.org/package=rgdal.\n\n\nBivand, Roger, and Colin Rundel. 2021. “Rgeos: Interface to\nGeometry Engine - Open Source (’GEOS’).†https://CRAN.R-project.org/package=rgeos.\n\n\nBrunet, Roger, Robert Ferras, and Hervé Théry. 1993. Les Mots de La\ngéographie: Dictionnaire Critique. 03) 911 BRU.\n\n\nCambon, Jesse, Diego Hernangómez, Christopher Belanger, and Daniel\nPossenriede. 2021. “Tidygeocoder: An r Package for\nGeocoding†6: 3544. https://doi.org/10.21105/joss.03544.\n\n\nCauvin, Colette, Francisco Escobar, and Aziz Serradj. 2013. Thematic\nCartography, Cartography and the Impact of the Quantitative\nRevolution. Vol. 2. John Wiley & Sons.\n\n\nCheng, Joe, Bhaskar Karambelkar, and Yihui Xie. 2022. “Leaflet:\nCreate Interactive Web Maps with the JavaScript ’Leaflet’\nLibrary.†https://CRAN.R-project.org/package=leaflet.\n\n\nDorling, Daniel. 1996. Area Cartograms: Their Use and Creation,\nConcepts and Techniques in Modern Geography. Vol. 59. CATMOG:\nConcepts and Techniques in Modern Geography. Institute of British\nGeographers.\n\n\nDougenik, James A, Nicholas R Chrisman, and Duane R Niemeyer. 1985.\n“An Algorithm to Construct Continuous Area Cartograms.â€\nThe Professional Geographer 37 (1): 75–81.\n\n\nDunnington, Dewey. 2021. “Ggspatial: Spatial Data Framework for\nGgplot2.†https://CRAN.R-project.org/package=ggspatial.\n\n\nGDAL/OGR contributors. n.d. GDAL/OGR Geospatial Data\nAbstraction Software Library. Open Source Geospatial Foundation. https://gdal.org.\n\n\nGilardi, Andrea, and Robin Lovelace. 2021. “Osmextract: Download\nand Import Open Street Map Data Extracts.†https://CRAN.R-project.org/package=osmextract.\n\n\nGiraud, Timothée. 2021a. “Linemap: Line Maps.†https://CRAN.R-project.org/package=linemap.\n\n\n———. 2021b. “Maptiles: Download and Display Map Tiles.†https://CRAN.R-project.org/package=maptiles.\n\n\n———. 2022a. “Mapsf: Thematic Cartography.†https://CRAN.R-project.org/package=mapsf.\n\n\n———. 2022b. “Tanaka: Design Shaded Contour Lines (or Tanaka)\nMaps.†https://CRAN.R-project.org/package=tanaka.\n\n\nGiraud, Timothée, and Nicolas Lambert. 2016. “Cartography: Create\nand Integrate Maps in Your r Workflow†1. https://doi.org/10.21105/joss.00054.\n\n\nGombin, Joel, and Paul-Antoine Chevalier. 2022. “banR: R Client\nfor the BAN API.â€\n\n\nHijmans, Robert J. 2022a. “Raster: Geographic Data Analysis and\nModeling.†https://CRAN.R-project.org/package=raster.\n\n\n———. 2022b. “Terra: Spatial Data Analysis.†https://CRAN.R-project.org/package=terra.\n\n\nJeworutzki, Sebastian. 2020. “Cartogram: Create Cartograms with\nr.†https://CRAN.R-project.org/package=cartogram.\n\n\nLambert, Nicolas. 2015. “Les Anamorphoses Cartographiques.â€\nBlog. Carnet Néocartographique. https://neocarto.hypotheses.org/366.\n\n\nLi, Xingong. 2009. “Map Algebra and Beyond : 1. Map Algebra for\nScalar Fields.†https://slideplayer.com/slide/5822638/.\n\n\nMadelin, Malika. 2021. “Analyse d’images Raster (Et\nTélédétection).†https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html.\n\n\nMennis, Jeremy. 2015. “Fundamentals of GIS : Raster\nOperations.†https://cupdf.com/document/gus-0262-fundamentals-of-gis-lecture-presentation-7-raster-operations-jeremy.html.\n\n\nNowosad, Jakub. 2021. “Image Processing and All Things\nRaster.†https://nowosad.github.io/SIGR2021/workshop2/workshop2.html.\n\n\nOlson, Judy M. 1976. “Noncontiguous Area Cartograms.â€\nThe Professional Geographer 28 (4): 371–80.\n\n\nPadgham, Mark, Bob Rudis, Robin Lovelace, and Maëlle Salmon. 2017.\n“Osmdata†2. https://doi.org/10.21105/joss.00305.\n\n\nPaull, John, and Benjamin Hennig. 2016. “Atlas of Organics: Four\nMaps of the World of Organic Agriculture.†Journal of\nOrganics 3 (1): 25–32.\n\n\nPebesma, Edzer. 2018b. “Simple Features for r:\nStandardized Support for Spatial Vector Data†10. https://doi.org/10.32614/RJ-2018-009.\n\n\n———. 2018a. “Simple Features for R: Standardized Support for\nSpatial Vector Data.†The R Journal 10 (1): 439. https://doi.org/10.32614/rj-2018-009.\n\n\n———. 2021. “Stars: Spatiotemporal Arrays, Raster and Vector Data\nCubes.†https://CRAN.R-project.org/package=stars.\n\n\nPebesma, Edzer J., and Roger S. Bivand. 2005. “Classes and Methods\nfor Spatial Data in r†5. https://CRAN.R-project.org/doc/Rnews/.\n\n\nPROJ contributors. 2021. PROJ Coordinate Transformation\nSoftware Library. Open Source Geospatial Foundation. https://proj.org/.\n\n\nRacine, Etienne B. 2016. “The Visual Raster Cheat Sheet.â€\nhttps://rpubs.com/etiennebr/visualraster.\n\n\nTanaka, Kitiro. 1950. “The Relief Contour Method of Representing\nTopography on Maps.†Geographical Review 40 (3): 444. https://doi.org/10.2307/211219.\n\n\nTennekes, Martijn. 2018. “Tmap: Thematic\nMaps in r†84. https://doi.org/10.18637/jss.v084.i06.\n\n\nTomlin, C. Dana. 1990. Geographic Information Systems and\nCartographic Modeling. Prentice Hall.\n\n\nWickham, Hadley. 2016. “Ggplot2: Elegant Graphics for Data\nAnalysis.†https://ggplot2.tidyverse.org."
+ "text": "Agafonkin, Vladimir. 2015. “Leaflet Javascript Libary.â€\n\n\nAppelhans, Tim, Florian Detsch, Christoph Reudenbach, and Stefan\nWoellauer. 2022. “Mapview: Interactive Viewing of Spatial Data in\nr.†https://CRAN.R-project.org/package=mapview.\n\n\nAppelhans, Tim, Kenton Russell, and Lorenzo Busetto. 2020.\n“Mapedit: Interactive Editing of Spatial Data in r.†https://CRAN.R-project.org/package=mapedit.\n\n\nBivand, Roger, Tim Keitt, and Barry Rowlingson. 2022. “Rgdal:\nBindings for the ’Geospatial’ Data Abstraction Library.†https://CRAN.R-project.org/package=rgdal.\n\n\nBivand, Roger, and Colin Rundel. 2021. “Rgeos: Interface to\nGeometry Engine - Open Source (’GEOS’).†https://CRAN.R-project.org/package=rgeos.\n\n\nBrunet, Roger, Robert Ferras, and Hervé Théry. 1993. Les Mots de La\ngéographie: Dictionnaire Critique. 03) 911 BRU.\n\n\nCambon, Jesse, Diego Hernangómez, Christopher Belanger, and Daniel\nPossenriede. 2021. “Tidygeocoder: An r Package for\nGeocoding†6: 3544. https://doi.org/10.21105/joss.03544.\n\n\nCauvin, Colette, Francisco Escobar, and Aziz Serradj. 2013. Thematic\nCartography, Cartography and the Impact of the Quantitative\nRevolution. Vol. 2. John Wiley & Sons.\n\n\nCheng, Joe, Bhaskar Karambelkar, and Yihui Xie. 2022. “Leaflet:\nCreate Interactive Web Maps with the JavaScript ’Leaflet’\nLibrary.†https://CRAN.R-project.org/package=leaflet.\n\n\nDorling, Daniel. 1996. Area Cartograms: Their Use and Creation,\nConcepts and Techniques in Modern Geography. Vol. 59. CATMOG:\nConcepts and Techniques in Modern Geography. Institute of British\nGeographers.\n\n\nDougenik, James A, Nicholas R Chrisman, and Duane R Niemeyer. 1985.\n“An Algorithm to Construct Continuous Area Cartograms.â€\nThe Professional Geographer 37 (1): 75–81.\n\n\nDunnington, Dewey. 2021. “Ggspatial: Spatial Data Framework for\nGgplot2.†https://CRAN.R-project.org/package=ggspatial.\n\n\nGDAL/OGR contributors. n.d. GDAL/OGR Geospatial Data\nAbstraction Software Library. Open Source Geospatial Foundation. https://gdal.org.\n\n\nGilardi, Andrea, and Robin Lovelace. 2021. “Osmextract: Download\nand Import Open Street Map Data Extracts.†https://CRAN.R-project.org/package=osmextract.\n\n\nGiraud, Timothée. 2021a. “Linemap: Line Maps.†https://CRAN.R-project.org/package=linemap.\n\n\n———. 2021b. “Maptiles: Download and Display Map Tiles.†https://CRAN.R-project.org/package=maptiles.\n\n\n———. 2022a. “Mapsf: Thematic Cartography.†https://CRAN.R-project.org/package=mapsf.\n\n\n———. 2022b. “Tanaka: Design Shaded Contour Lines (or Tanaka)\nMaps.†https://CRAN.R-project.org/package=tanaka.\n\n\nGiraud, Timothée, and Nicolas Lambert. 2016. “Cartography: Create\nand Integrate Maps in Your r Workflow†1. https://doi.org/10.21105/joss.00054.\n\n\nGombin, Joel, and Paul-Antoine Chevalier. 2022. “banR: R Client\nfor the BAN API.â€\n\n\nHerbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018.\n“GeoHealth and QuickOSM, two QGIS plugins for\nhealth applications.†In Earth\nSystems - Environmental Sciences : QGIS in Remote Sensing\nSet, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez\nZribi, 1:257–86. QGIS and Generic Tools. ISTE. https://hal.archives-ouvertes.fr/hal-01787435.\n\n\nHijmans, Robert J. 2022a. “Raster: Geographic Data Analysis and\nModeling.†https://CRAN.R-project.org/package=raster.\n\n\n———. 2022b. “Terra: Spatial Data Analysis.†https://CRAN.R-project.org/package=terra.\n\n\nJeworutzki, Sebastian. 2020. “Cartogram: Create Cartograms with\nr.†https://CRAN.R-project.org/package=cartogram.\n\n\nLambert, Nicolas. 2015. “Les Anamorphoses Cartographiques.â€\nBlog. Carnet Néocartographique. https://neocarto.hypotheses.org/366.\n\n\nLi, Xingong. 2009. “Map Algebra and Beyond : 1. Map Algebra for\nScalar Fields.†https://slideplayer.com/slide/5822638/.\n\n\nLongour, Lucas, Jeremy Commins, and Vincent Herbreteau. 2022.\n“RGeoHealth: RGeoHealth.â€\n\n\nMadelin, Malika. 2021. “Analyse d’images Raster (Et\nTélédétection).†https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html.\n\n\nMennis, Jeremy. 2015. “Fundamentals of GIS : Raster\nOperations.†https://cupdf.com/document/gus-0262-fundamentals-of-gis-lecture-presentation-7-raster-operations-jeremy.html.\n\n\nNowosad, Jakub. 2021. “Image Processing and All Things\nRaster.†https://nowosad.github.io/SIGR2021/workshop2/workshop2.html.\n\n\nOlson, Judy M. 1976. “Noncontiguous Area Cartograms.â€\nThe Professional Geographer 28 (4): 371–80.\n\n\nPadgham, Mark, Bob Rudis, Robin Lovelace, and Maëlle Salmon. 2017.\n“Osmdata†2. https://doi.org/10.21105/joss.00305.\n\n\nPaull, John, and Benjamin Hennig. 2016. “Atlas of Organics: Four\nMaps of the World of Organic Agriculture.†Journal of\nOrganics 3 (1): 25–32.\n\n\nPebesma, Edzer. 2018b. “Simple Features for r:\nStandardized Support for Spatial Vector Data†10. https://doi.org/10.32614/RJ-2018-009.\n\n\n———. 2018a. “Simple Features for R: Standardized Support for\nSpatial Vector Data.†The R Journal 10 (1): 439. https://doi.org/10.32614/rj-2018-009.\n\n\n———. 2021. “Stars: Spatiotemporal Arrays, Raster and Vector Data\nCubes.†https://CRAN.R-project.org/package=stars.\n\n\nPebesma, Edzer J., and Roger S. Bivand. 2005. “Classes and Methods\nfor Spatial Data in r†5. https://CRAN.R-project.org/doc/Rnews/.\n\n\nPROJ contributors. 2021. PROJ Coordinate Transformation\nSoftware Library. Open Source Geospatial Foundation. https://proj.org/.\n\n\nRacine, Etienne B. 2016. “The Visual Raster Cheat Sheet.â€\nhttps://rpubs.com/etiennebr/visualraster.\n\n\nTanaka, Kitiro. 1950. “The Relief Contour Method of Representing\nTopography on Maps.†Geographical Review 40 (3): 444. https://doi.org/10.2307/211219.\n\n\nTennekes, Martijn. 2018. “Tmap: Thematic\nMaps in r†84. https://doi.org/10.18637/jss.v084.i06.\n\n\nTomlin, C. Dana. 1990. Geographic Information Systems and\nCartographic Modeling. Prentice Hall.\n\n\nWickham, Hadley. 2016. “Ggplot2: Elegant Graphics for Data\nAnalysis.†https://ggplot2.tidyverse.org."
+ },
+ {
+ "objectID": "06-advanced_spatial_analysis.html",
+ "href": "06-advanced_spatial_analysis.html",
+ "title": "6Â Advanced Spatial Analysis",
+ "section": "",
+ "text": "RGeoHealth (Herbreteau, Révillion, and Trimaille 2018)\n\n\n\n\nHerbreteau, Vincent, Christophe Révillion, and Etienne Trimaille. 2018. “GeoHealth and QuickOSM, two QGIS plugins for health applications.†In Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set, edited by Nicolas Baghdadi, Clément Mallet, and Mehrez Zribi, 1:257–86. QGIS and Generic Tools. ISTE. https://hal.archives-ouvertes.fr/hal-01787435."
}
]
\ No newline at end of file
diff --git a/references.bib b/references.bib
index 5ac1f00..8df9964 100644
--- a/references.bib
+++ b/references.bib
@@ -379,4 +379,29 @@ Library},
publisher={Prentice Hall},
author={Tomlin, C. Dana},
year={1990}
-}
\ No newline at end of file
+}
+
+@incollection{herbreteau:hal-01787435,
+ TITLE = {{GeoHealth and QuickOSM, two QGIS plugins for health applications}},
+ AUTHOR = {Herbreteau, Vincent and R{\'e}villion, Christophe and Trimaille, Etienne},
+ URL = {https://hal.archives-ouvertes.fr/hal-01787435},
+ BOOKTITLE = {{Earth Systems - Environmental Sciences : QGIS in Remote Sensing Set}},
+ EDITOR = {Nicolas Baghdadi and Cl{\'e}ment Mallet and Mehrez Zribi},
+ PUBLISHER = {{ISTE}},
+ SERIES = {QGIS and Generic Tools},
+ VOLUME = {1},
+ PAGES = {257-286},
+ YEAR = {2018},
+ MONTH = Jan,
+ KEYWORDS = {METHODOLOGIE ; LOGICIEL D'APPLICATION ; REPRESENTATION CARTOGRAPHIQUE ; SANTE ; SYSTEME D'INFORMATION GEOGRAPHIQUE ; ANALYSE SPATIALE},
+ PDF = {https://hal.archives-ouvertes.fr/hal-01787435/file/Herbreteau_Chapter7_GeoHealth_2018_author.pdf},
+ HAL_ID = {hal-01787435},
+ HAL_VERSION = {v1},
+}
+
+@article{RGeoHealth,
+ title = {RGeoHealth: RGeoHealth},
+ author = {Longour, Lucas and Commins, Jeremy and Herbreteau, Vincent},
+ year = {2022},
+ date = {2022}
+}
--
GitLab