update with ascii human file, dot extension

Makefile

@@ -9,7 +9,7 @@ OPTIONS_LADCP = data/LADCP/*.lad -i LADCP -k DEPTH EWCT NSCT
 OPTIONS_BTL =  data/CTD/btl/fr290*.btl -i BTL -k BOTL PRES DEPTH ETDD TE01 TE02 PSA1 PSA2 DO11 DO12 DO21 DO22 FLU2
 OPTIONS_COLCOR = data/TSG/COLCOR/*.colcor -i TSG -k SSJT SSTP SSPS
 OPTIONS_SEASAVE = data/TSG/SEASAVE/*.cnv -i TSG -k SSJT SSTP SSPS
-OPTIONS_CASINO = data/CASINO/*.csv -i CASINO -k LATITUDE LONGITUDE SSJT SSTP SSPS
+OPTIONS_CASINO = data/CASINO/*.csv -i CASINO -k LATITUDE LONGITUDE SSJT SSTP SSPS WMSP WDIR
 
 .PHONY: clean-pyc clean-build lint test run build
 

ascii.py

@@ -142,7 +142,7 @@ def writeProfile(cfg, device, fe, r):
     writeDataProfile(fileName, cfg, device.lower(), fe, r)
     print(' done...')
 
-def writeDataTrajectory(dataFile, cfg, device, fe, r):
+def writeDecimalDataTrajectory(dataFile, cfg, device, fe, r):
     f = open(dataFile, 'w')
 
     # write header, first line
@@ -160,6 +160,7 @@ def writeDataTrajectory(dataFile, cfg, device, fe, r):
     for k in fe.keys:
         f.write(f"  {k}  ")
     f.write("\n")
+    # write data
     for n in range(fe.n):
         for k in fe.keys: 
             fmt = fe.roscop[k]['format']
@@ -170,19 +171,64 @@ def writeDataTrajectory(dataFile, cfg, device, fe, r):
         f.write("\n")
     f.close()
 
+def writeHumanDataTrajectory(dataFile, cfg, device, fe, r):
+    f = open(dataFile, 'w')
+
+    # write header, first line
+    f.write("{}  {}  {}  ".format(cfg['cruise']['CYCLEMESURE'], 
+        cfg['cruise']['PLATEFORME'], cfg['cruise']['INSTITUTE']))
+    if 'typeInstrument' in cfg[device]:
+        f.write(f"{cfg[device]['typeInstrument']}")
+    if 'instrumentNumber' in cfg[device]:
+        f.write(f"{cfg[device]['instrumentNumber']}")
+    if 'PI' in cfg['cruise']:
+        f.write(f"{cfg['cruise']['PI']}")
+    f.write("\n")
+
+    # write header, second line with physical parameter liste, fill with N/A if necessary
+    for k in fe.keys:
+        if k == 'DAYD':
+            f.write("    DATE      TIME   ")
+            continue
+        f.write(f"   {k}  ")
+    f.write("\n")
+    # write data
+    for n in range(fe.n):
+        for k in fe.keys: 
+            if k == 'LATITUDE':
+                f.write(f" {tools.Dec2dmc(fe[k][n],'N')} ")
+                continue
+            if k == 'LONGITUDE':
+                f.write(f" {tools.Dec2dmc(fe[k][n],'E')} ")
+                continue
+            if k == 'DAYD':
+                dt = tools.julian2dt(fe[k][n])
+                f.write(f" {dt.strftime('%d/%m/%Y %H:%M:%S')} ")
+                continue
+            fmt = fe.roscop[k]['format']
+            if '_FillValue' in fe.roscop[k] and fe[k][n] == fe.roscop[k]['_FillValue']:
+                f.write('  1e+36 ')
+            else:
+                f.write(f" {fmt} " % (fe[k][n]))
+        f.write("\n")
+    f.close()
+
 
 def writeTrajectory(cfg, device, fe, r):
     if not os.path.exists(cfg['global']['ASCII']):
         os.makedirs(cfg['global']['ASCII'])
-        
-    # fileName = "{}/{}.{}".format(cfg['global']['ASCII'], 
-    #     cfg['cruise']['CYCLEMESURE'], device.lower())
-    # logging.debug('writing header file: {}'.format(fileName))
-    # writeHeaderProfile(fileName, cfg, device.lower(), fe, r, )
     
+    # write ascii file with human read time and position
+    fileName = "{}/{}.{}".format(cfg['global']['ASCII'], 
+        cfg['cruise']['CYCLEMESURE'], device.lower())
+    print('writing file: {}'.format(fileName), end='', flush=True)
+    writeHumanDataTrajectory(fileName, cfg, device.lower(), fe, r, )
+    print(' done...')
+    
+    # write ascii file with decimal time and position
     fileName = "{}/{}_{}".format(cfg['global']['ASCII'], 
         cfg['cruise']['CYCLEMESURE'], device.lower())
-    print('writing  data  file: {}'.format(fileName), end='', flush=True)
-    writeDataTrajectory(fileName, cfg, device.lower(), fe, r)
+    print('writing file: {}'.format(fileName), end='', flush=True)
+    writeDecimalDataTrajectory(fileName, cfg, device.lower(), fe, r)
     print(' done...')
    
\ No newline at end of file

code_roscop.csv

@@ -18,12 +18,12 @@ DOX2,float32,dissolved oxygen,moles_of_oxygen_per_unit_mass_in_sea_water,micromo
 DENS,float32,density,sea_water_density,kg/m3,,TIME DEPTH LATITUDE LONGITUDE,,-1.5,38,%6.3f,1E+36,,0.001,Ocean density,,,,,
 SVEL,float32,sound velocity,speed_of_sound_in_sea_water,meter/second,,TIME DEPTH LATITUDE LONGITUDE,,1350,1600,%7.2f,1E+36,,0.001,Ocean sound velocity,,,,,
 DRYT,float32,air temperature,air_temperature,degree_Celsius,,TIME DEPTH LATITUDE LONGITUDE,,-1.5,38,%6.3f,1E+36,,0.001,Air temperature,,,,,
-WMSP,float32,wind speed - max aver per 2 mn,wind_speed,meter/second,,TIME DEPTH LATITUDE LONGITUDE,,0,200,%6.3f,1E+36,,0.001,Horizontal wind speed,,,,,
-WDIR,float32,wind direction rel. true north,wind_to_direction,degree,,TIME DEPTH LATITUDE LONGITUDE,,0,360,%5.1f,1E+36,,0.001,Horizontal wind speed,,,,,
-ATMS,float32,atmospheric pressure - sea lev,air_pressure_at_sea_level,hectoPascal,,TIME DEPTH LATITUDE LONGITUDE,,940,1030,%8.3f,1E+36,,0.001,Atmospheric pressure at sea level,,,,,
-RELH,float32,relative humidity,relative_humidity,%,,TIME DEPTH LATITUDE LONGITUDE,,0,100,%6.1f,1E+36,,0.001,Relative humidity,,,,,
-NSCT,float32,current north component,,cm/second,,TIME DEPTH LATITUDE LONGITUDE,,-100,100,%7.3f,1E+36,,0.01," Current north",,,,,
-EWCT,float32,current east component,,cm/second,,TIME DEPTH LATITUDE LONGITUDE,,-100,100,%7.3f,1E+36,,0.02,Current east,,,,,
+WMSP,float32,wind speed - max aver per 2 mn,wind_speed,meter/second,,TIME DEPTH LATITUDE LONGITUDE,,0,200,%4.1f,1E+36,,0.001,Horizontal wind speed,,,,,
+WDIR,float32,wind direction rel. true north,wind_to_direction,degree,,TIME DEPTH LATITUDE LONGITUDE,,0,360,%3.0f,1E+36,,0.001,Horizontal wind speed,,,,,
+ATMS,float32,atmospheric pressure - sea lev,air_pressure_at_sea_level,hectoPascal,,TIME DEPTH LATITUDE LONGITUDE,,940,1030,%6.1f,1E+36,,0.001,Atmospheric pressure at sea level,,,,,
+RELH,float32,relative humidity,relative_humidity,%,,TIME DEPTH LATITUDE LONGITUDE,,0,100,%4.1f,1E+36,,0.001,Relative humidity,,,,,
+NSCT,float32,current north component,,cm/second,,TIME DEPTH LATITUDE LONGITUDE,,-100,100,%7.2f,1E+36,,0.01," Current north",,,,,
+EWCT,float32,current east component,,cm/second,,TIME DEPTH LATITUDE LONGITUDE,,-100,100,%7.2f,1E+36,,0.02,Current east,,,,,
 SSJT,float32,sea surface water jacket temperature,sea_water_temperature,degree_Celsius,,TIME DEPTH LATITUDE LONGITUDE,,-1.5,38,%6.3f,-300,,0.001,Ocean temperature,,,,,
 SSTP,float32,sea surface water temperature,sea_water_temperature,degree_Celsius,,TIME DEPTH LATITUDE LONGITUDE,,-1.5,38,%6.3f,-300,,0.001,Sea surface Ocean temperature,,,,,
 SSPS,float32,sea surface practical salinity,"sea_water_salinity ",pss,,TIME DEPTH LATITUDE LONGITUDE,,-1.5,38,%6.3f,-1,,0.001,Ocean salinity,,,,,

config.toml

@@ -258,3 +258,7 @@ comment        = "Extract from .csv files"
 	SSTP = 94
 	SSJT = 95
 	SSPS = 96
+	WMSP = 65
+	WDIR = 64
+	DRYT = 66
+	RELH = 68