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US191
Oceano2python
Commits
a1515006
Commit
a1515006
authored
Mar 23, 2019
by
jacques.grelet_ird.fr
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split code with functions
parent
c387ad22
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oceano.py
+59
-49
59 additions, 49 deletions
oceano.py
with
59 additions
and
49 deletions
oceano.py
+
59
−
49
View file @
a1515006
...
@@ -15,6 +15,58 @@ typeInstrument = {'CTD': 'cnv', 'XBT': 'edf', 'LADCP': 'lad', 'TSG': 'COLCOR'}
...
@@ -15,6 +15,58 @@ typeInstrument = {'CTD': 'cnv', 'XBT': 'edf', 'LADCP': 'lad', 'TSG': 'COLCOR'}
ti
=
typeInstrument
# an alias
ti
=
typeInstrument
# an alias
def
processArgs
():
parser
=
argparse
.
ArgumentParser
(
description
=
'
This program read multiple ASCII file, extract physical parameter
\
following ROSCOP codification at the given column, fill arrays, write header file
'
,
usage
=
'
\n
python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -i CTD -d
\n
'
'
python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -i CTD -k PRES TEMP PSAL DOX2 DENS
\n
'
'
python oceano.py data/CTDcnv/dfr29*.cnv -d
\n
'
'
python oceano.py data/XBT/T7_0000*.EDF -i XBT -k DEPTH TEMP SVEL
\n
'
"
python oceano.py data/LADCP/*.lad -i LADCP -k DEPTH EWCT NSCT
"
,
epilog
=
'
J. Grelet IRD US191 - March 2019
'
)
parser
.
add_argument
(
'
-d
'
,
'
--debug
'
,
help
=
'
display debug informations
'
,
action
=
'
store_true
'
)
parser
.
add_argument
(
'
-c
'
,
'
--config
'
,
help
=
"
toml configuration file, (default: %(default)s)
"
,
default
=
'
tests/test.toml
'
)
parser
.
add_argument
(
'
-i
'
,
'
--instrument
'
,
nargs
=
'
?
'
,
default
=
'
CTD
'
,
help
=
'
specify the instrument that produce files, eg CTD, XBT, TSG, LADCP (default: %(default)s)
'
)
parser
.
add_argument
(
'
-k
'
,
'
--key
'
,
nargs
=
'
+
'
,
default
=
[
'
PRES
'
,
'
TEMP
'
,
'
PSAL
'
],
help
=
'
display dictionary for key(s), (default: %(default)s)
'
)
parser
.
add_argument
(
'
-g
'
,
'
--gui
'
,
action
=
'
store_true
'
,
help
=
'
use GUI interface
'
)
parser
.
add_argument
(
'
files
'
,
nargs
=
'
*
'
,
help
=
'
cnv file(s) to parse, (default: data/cnv/dfr29*.cnv)
'
)
return
parser
def
defineGUI
():
# change look and feel color scheme
sg
.
ChangeLookAndFeel
(
'
SandyBeach
'
)
# define GUI layout
layout
=
([[
sg
.
Text
(
'
File(s) to read and convert
'
)],
[
sg
.
Multiline
(
size
=
(
40
,
5
),
key
=
'
_IN_
'
),
sg
.
Input
(
key
=
'
_HIDDEN_
'
,
visible
=
False
,
enable_events
=
True
),
sg
.
FilesBrowse
(
key
=
'
_HIDDEN_
'
,
tooltip
=
'
Choose one or more files
'
,
initial_folder
=
'
data/{}
'
.
format
(
ti
[
device
]),
file_types
=
((
"
{} files
"
.
format
(
ti
[
device
]),
"
*.{}
"
.
format
(
ti
[
device
])),))],
[
sg
.
Combo
(
list
(
ti
.
keys
()),
enable_events
=
True
,
key
=
'
_COMBO_
'
,
tooltip
=
'
Select the instrument
'
)],
*
[[
sg
.
Checkbox
(
k
,
key
=
k
,
tooltip
=
'
Select the extract the physical parameter {}
'
.
format
(
k
))]
for
k
in
keys
],
[
sg
.
OK
(),
sg
.
CloseButton
(
'
Cancel
'
)]])
# [sg.CloseButton('Run'), sg.CloseButton('Cancel')]])
# create a local instance windows used to reload the saved config from file
window
=
sg
.
Window
(
'
Oceano converter
'
).
Layout
(
layout
)
window
.
LoadFromDisk
(
configfile
)
window
.
Finalize
return
window
def
process
(
args
,
cfg
,
ti
):
def
process
(
args
,
cfg
,
ti
):
'''
'''
Extract data from ASCII files and return FileExtractor instannce and array size of extracted data
Extract data from ASCII files and return FileExtractor instannce and array size of extracted data
...
@@ -55,27 +107,8 @@ if __name__ == "__main__":
...
@@ -55,27 +107,8 @@ if __name__ == "__main__":
> python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -k PRES TEMP PSAL DOX2 DENS
> python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -k PRES TEMP PSAL DOX2 DENS
> python oceano.py data/CTD/cnv/dfr29*.cnv -d
> python oceano.py data/CTD/cnv/dfr29*.cnv -d
'''
'''
parser
=
argparse
.
ArgumentParser
(
# recover and process line arguments
description
=
'
This program read multiple ASCII file, extract physical parameter
\
parser
=
processArgs
()
following ROSCOP codification at the given column, fill arrays, write header file
'
,
usage
=
'
\n
python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -i CTD -d
\n
'
'
python oceano.py data/CTD/cnv/dfr2900[1-3].cnv -i CTD -k PRES TEMP PSAL DOX2 DENS
\n
'
'
python oceano.py data/CTDcnv/dfr29*.cnv -d
\n
'
'
python oceano.py data/XBT/T7_0000*.EDF -i XBT -k DEPTH TEMP SVEL
\n
'
"
python oceano.py data/LADCP/*.lad -i LADCP -k DEPTH EWCT NSCT -d
"
,
epilog
=
'
J. Grelet IRD US191 - March 2019
'
)
parser
.
add_argument
(
'
-d
'
,
'
--debug
'
,
help
=
'
display debug informations
'
,
action
=
'
store_true
'
)
parser
.
add_argument
(
'
-c
'
,
'
--config
'
,
help
=
"
toml configuration file, (default: %(default)s)
"
,
default
=
'
tests/test.toml
'
)
parser
.
add_argument
(
'
-i
'
,
'
--instrument
'
,
nargs
=
'
?
'
,
default
=
'
CTD
'
,
help
=
'
specify the instrument that produce files, eg CTD, XBT, TSG, LADCP (default: %(default)s)
'
)
parser
.
add_argument
(
'
-k
'
,
'
--key
'
,
nargs
=
'
+
'
,
default
=
[
'
PRES
'
,
'
TEMP
'
,
'
PSAL
'
],
help
=
'
display dictionary for key(s), (default: %(default)s)
'
)
parser
.
add_argument
(
'
-g
'
,
'
--gui
'
,
action
=
'
store_true
'
,
help
=
'
use GUI interface
'
)
parser
.
add_argument
(
'
files
'
,
nargs
=
'
*
'
,
help
=
'
cnv file(s) to parse, (default: data/cnv/dfr29*.cnv)
'
)
args
=
parser
.
parse_args
()
args
=
parser
.
parse_args
()
# initialize filename use to save GUI configuration
# initialize filename use to save GUI configuration
...
@@ -94,29 +127,7 @@ if __name__ == "__main__":
...
@@ -94,29 +127,7 @@ if __name__ == "__main__":
# test arguements from sys.argv, args is never to None with default option set
# test arguements from sys.argv, args is never to None with default option set
if
args
.
gui
or
len
(
sys
.
argv
)
==
1
:
if
args
.
gui
or
len
(
sys
.
argv
)
==
1
:
# change look and feel color scheme
window
=
defineGUI
()
sg
.
ChangeLookAndFeel
(
'
SandyBeach
'
)
# define GUI layout
layout
=
([[
sg
.
Text
(
'
File(s) to read and convert
'
)],
[
sg
.
Multiline
(
size
=
(
40
,
5
),
key
=
'
_IN_
'
),
sg
.
Input
(
key
=
'
_HIDDEN_
'
,
visible
=
False
,
enable_events
=
True
),
sg
.
FilesBrowse
(
key
=
'
_HIDDEN_
'
,
tooltip
=
'
Choose one or more files
'
,
initial_folder
=
'
data/{}
'
.
format
(
ti
[
device
]),
file_types
=
((
"
{} files
"
.
format
(
ti
[
device
]),
"
*.{}
"
.
format
(
ti
[
device
])),))],
[
sg
.
Combo
(
list
(
ti
.
keys
()),
enable_events
=
True
,
key
=
'
_COMBO_
'
,
tooltip
=
'
Select the instrument
'
)],
*
[[
sg
.
Checkbox
(
k
,
key
=
k
,
tooltip
=
'
Select the extract the physical parameter {}
'
.
format
(
k
))]
for
k
in
keys
],
[
sg
.
OK
(),
sg
.
CloseButton
(
'
Cancel
'
)]])
# [sg.CloseButton('Run'), sg.CloseButton('Cancel')]])
# create a local instance windows used to reload the saved config from file
window
=
sg
.
Window
(
'
Oceano converter
'
).
Layout
(
layout
)
window
.
LoadFromDisk
(
configfile
)
window
.
Finalize
# main GUI loop
# main GUI loop
while
True
:
while
True
:
...
@@ -127,19 +138,18 @@ if __name__ == "__main__":
...
@@ -127,19 +138,18 @@ if __name__ == "__main__":
if
event
is
'
Cancel
'
or
event
==
None
:
if
event
is
'
Cancel
'
or
event
==
None
:
raise
SystemExit
(
"
Cancelling: user exit
"
)
raise
SystemExit
(
"
Cancelling: user exit
"
)
if
event
is
'
OK
'
:
if
event
is
'
OK
'
:
# end of initialization, process data now
break
break
if
event
is
'
_COMBO_
'
:
if
event
is
'
_COMBO_
'
:
# you have to go into the bowels of the pygi code, to get the instance of the Combo
# by the line and column number of the window to update its "fileType" property.
e
=
window
.
Rows
[
1
][
2
]
e
=
window
.
Rows
[
1
][
2
]
# print(e.FileTypes)
e
.
FileTypes
=
((
"
{} files
"
.
format
(
e
.
FileTypes
=
((
"
{} files
"
.
format
(
ti
[
values
[
'
_COMBO_
'
]]),
"
*.{}
"
.
format
(
ti
[
values
[
'
_COMBO_
'
]])),)
ti
[
values
[
'
_COMBO_
'
]]),
"
*.{}
"
.
format
(
ti
[
values
[
'
_COMBO_
'
]])),)
window
.
Finalize
window
.
Finalize
# print(e.FileTypes)
# window.FindElement('_HIDDEN_').File_types = (
# ("{} files".format(ti[values['_COMBO_']]), "*.{}".format(ti[values['_COMBO_']])),)
# update the Multilines instance from FilesBrowse return
if
event
is
'
_HIDDEN_
'
:
if
event
is
'
_HIDDEN_
'
:
window
.
Element
(
'
_IN_
'
).
Update
(
window
.
Element
(
'
_IN_
'
).
Update
(
values
[
'
_HIDDEN_
'
].
split
(
'
;
'
))
values
[
'
_HIDDEN_
'
].
split
(
'
;
'
))
...
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