add && apk --no-cache add \

        --repository http://dl-cdn.alpinelinux.org/alpine/edge/testing/ \
        hdf5 \
    && apk --no-cache add --virtual .builddeps.edge \
        --repository http://dl-cdn.alpinelinux.org/alpine/edge/testing/ \
    hdf5-dev \

docker/Dockerfile

@@ -2,63 +2,69 @@ FROM alpine:3.6
 LABEL maintainer="Jacques.Grelet_at_ird.fr"
 
 ENV PACKAGES="\
-  	dumb-init \
- 	musl \
- 	libc6-compat \
+    dumb-init \
+    musl \
+    libc6-compat \
     linux-headers \
-	build-base \
-	bash \
-	make \
-	git \
-	cmake \
-	netcdf-bin \
-	libnetcdf-dev \ 
-	libxml2 \
-	libxml2-dev \
-	hdf5 \
-	hdf5-dev \
+    build-base \
+    bash \
+    make \
+    git \
+    cmake \
+    libxml2 \
+    libxml2-dev \
+#    hdf5 \
+#    hdf5-dev \
+    netcdf-bin \
+    libnetcdf-dev \ 
     ca-certificates \
-	libgcc \
-	libstdc++ \
-	tcl \
-	tk \
+    libgcc \
+    libstdc++ \
+    tcl \
+    tk \
     libssl1.0 \
-	net-tools \
-	iputils-ping \
+    net-tools \
+    iputils-ping \
     "
 
 ENV PYTHON_PACKAGES="\
     numpy \
     matplotlib \
-	scipy \
-	https://github.com/matplotlib/basemap/archive/v1.1.0.tar.gz \
-	toml \ 
-	pynmea2 \
-	pySerial \ 
-	netCDF4 \ 	
-	seawater \
-	PyInstaller \ 
-	PySimpleGUI \
-	PySimpleGUIQt \
-	ConfigParser \
-	PySide2 \
-	PyAstronomy \
-    	"
+    scipy \
+    https://github.com/matplotlib/basemap/archive/v1.1.0.tar.gz \
+    toml \ 
+    pynmea2 \
+    pySerial \ 
+    netCDF4 \    
+    seawater \
+    PyInstaller \ 
+    PySimpleGUI \
+    PySimpleGUIQt \
+    ConfigParser \
+    PySide2 \
+    PyAstronomy \
+    "
  
 RUN apk add --no-cache --virtual build-dependencies python3 \
-	&& apk add --virtual build-runtime \
-	build-base python3-dev freetype-dev pkgconfig \
-	&& ln -s /usr/include/locale.h /usr/include/xlocale.h \
-	&& python3 -m ensurepip \
-	&& rm -r /usr/lib/python*/ensurepip \
-	&& pip3 install --upgrade pip setuptools \
-	&& ln -sf /usr/bin/python3 /usr/bin/python \
-	&& ln -sf pip3 /usr/bin/pip \
-	&& rm -r /root/.cache \
-	&& pip install --no-cache-dir $PYTHON_PACKAGES \
-	&& apk del build-runtime \
-	&& apk add --no-cache --virtual build-dependencies $PACKAGES \
-	&& rm -rf /var/cache/apk/*
+    && apk add --virtual build-runtime \
+    build-base python3-dev freetype-dev pkgconfig \
+    && ln -s /usr/include/locale.h /usr/include/xlocale.h \
+    && python3 -m ensurepip \
+    && rm -r /usr/lib/python*/ensurepip \
+    && pip3 install --upgrade pip setuptools \
+    && ln -sf /usr/bin/python3 /usr/bin/python \
+    && ln -sf pip3 /usr/bin/pip \
+    && rm -r /root/.cache \
+    && apk --no-cache add \
+        --repository http://dl-cdn.alpinelinux.org/alpine/edge/testing/ \
+        hdf5 \
+    && apk --no-cache add --virtual .builddeps.edge \
+        --repository http://dl-cdn.alpinelinux.org/alpine/edge/testing/ \
+    hdf5-dev \
+    && pip install --no-cache-dir $PYTHON_PACKAGES \
+    && apk del build-runtime \
+    && apk add --no-cache --virtual build-dependencies $PACKAGES \
+    && rm -rf /var/cache/apk/* 
 
 VOLUME /data
 RUN groupadd -r scientifiques && useradd -r -g scientifiques -p antea science