Dockerfile

FROM alpine:3.6
LABEL maintainer="Jacques.Grelet_at_ird.fr"

ENV PACKAGES="\
  	dumb-init \
 	musl \
 	libc6-compat \
    linux-headers \
	build-base \
	bash \
	make \
	git \
	cmake \
	netcdf-bin \
	libnetcdf-dev \ 
	libxml2 \
	libxml2-dev \
	hdf5 \
	hdf5-dev \
    ca-certificates \
	libgcc \
	libstdc++ \
	tcl \
	tk \
    libssl1.0 \
	net-tools \
	iputils-ping \
    "

ENV PYTHON_PACKAGES="\
    numpy \
    matplotlib \
	scipy \
	https://github.com/matplotlib/basemap/archive/v1.1.0.tar.gz \
	toml \ 
	pynmea2 \
	pySerial \ 
	netCDF4 \ 	
	seawater \
	PyInstaller \ 
	PySimpleGUI \
	PySimpleGUIQt \
	ConfigParser \
	PySide2 \
	PyAstronomy \
    	"
 
RUN apk add --no-cache --virtual build-dependencies python3 \
	&& apk add --virtual build-runtime \
	build-base python3-dev freetype-dev pkgconfig \
	&& ln -s /usr/include/locale.h /usr/include/xlocale.h \
	&& python3 -m ensurepip \
	&& rm -r /usr/lib/python*/ensurepip \
	&& pip3 install --upgrade pip setuptools \
	&& ln -sf /usr/bin/python3 /usr/bin/python \
	&& ln -sf pip3 /usr/bin/pip \
	&& rm -r /root/.cache \
	&& pip install --no-cache-dir $PYTHON_PACKAGES \
	&& apk del build-runtime \
	&& apk add --no-cache --virtual build-dependencies $PACKAGES \
	&& rm -rf /var/cache/apk/*

VOLUME /data
RUN groupadd -r scientifiques && useradd -r -g scientifiques -p antea science 
USER science
WORKDIR /home/science
#COPY .bashrc /root
COPY .bashrc /home/science