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function tsgqc
% tsgqc
% Thermosalinograph (TSG) Quality Control software
%
% $Id$
%

%% COPYRIGHT & LICENSE
%  Copyright 2007 - IRD US191, all rights reserved.
%
%  This file is part of tsgqc.
%
%    Datagui is free software; you can redistribute it and/or modify
%    it under the terms of the GNU General Public License as published by
%    the Free Software Foundation; either version 2 of the License, or
%    (at your option) any later version.
%
%    tsgqc is distributed in the hope that it will be useful,
%    but WITHOUT ANY WARRANTY; without even the implied warranty of
%    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
%    GNU General Public License for more details.
%
%    You should have received a copy of the GNU General Public License
%    along with Datagui; if not, write to the Free Software
%    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA


%%  Initialization tasks
%   ********************

% Clear Command Window display, giving up a "clean screen."
% ---------------------------------------------------------
clc;

% Define global variable VERSION number
% -------------------------------------
global VERSION

VERSION = '0.2f';
 
% Find program directory.
% functions (icons) should be store at a lower level
% add directories to Matlab search path, works on UNIX
% and Windows host
% ---------------------------------------------------
tsgqcname = mfilename;
fulltsgqcname = mfilename('fullpath');
DEFAULT_PATH_FILE = strrep(fulltsgqcname, tsgqcname, '') ;
p = [pathsep,...
  DEFAULT_PATH_FILE,[filesep 'tsg_util' pathsep],...
  DEFAULT_PATH_FILE,[filesep 'tsg_data' pathsep],...
  DEFAULT_PATH_FILE,[filesep 'tsg_io' pathsep]
  ];
addpath( p, '-END' );
rehash;

% define 'HandleVisibility' property for all objects
% --------------------------------------------------
handleVisibility = 'on';

% get screen dimensions (pixels)
% ------------------------------
set(0,'Units','pixels');
screenSize = get(0,'ScreenSize');

% define default font size based on screen resolution
% ---------------------------------------------------
if screenSize(3) <= 1024
  tsg.fontSize = 9;
end

% Screen limits for the GUI
% -------------------------
set(0,'Units','normalized');
guiLimits = get(0,'ScreenSize');
guiLimits(1) = guiLimits(1) + 0.01;
guiLimits(2) = guiLimits(2) + 0.05;
guiLimits(3) = guiLimits(3) - 0.02;
guiLimits(4) = guiLimits(4) - 0.15;


%% Main TSGQC GUI
% ---------------

% Check if main TSGQC figure exist
% --------------------------------
hMainFig = findobj('Tag', 'TAG_TSG-QC_GUI');

% if TSGQC figure exist and still running, don't create a new instance
% --------------------------------------------------------------------
if ~isempty(hMainFig)

  % display error dialog box and quit 
  % ---------------------------------
  errordlg({'An instance of TSGQC is still running !!!', ...
    'Open it from you task bar'}, 'Warning TSGQC');
  return;
  
end
    
% Create and then hide the GUI as it is being constructed.
% --------------------------------------------------------
hMainFig = figure(...
  'Name', 'TSG Validation', ...
  'NumberTitle', 'off', ...
  'Resize', 'on', ...
  'Menubar','none', ...
  'Toolbar', 'none', ...
  'UserData', 'ButtonMotionOff', ...
  'WindowButtonMotionFcn', @MouseMotion, ...
%{
   CloseRequestFcn is remove at this time
   use use block comments, see:
   http://blogs.mathworks.com/loren/2006/08/30/commenting-code/
   --------------------------------------
  'CloseRequestFcn', @QuitMenuCallback,...
%}
'HandleVisibility', handleVisibility,...
  'Visible','on',...
  'Tag','TAG_TSG-QC_GUI',...
  'Units', 'normalized',...
  'Position',guiLimits, ...
  'Color', get( 0, 'DefaultUIControlBackgroundColor' ));



%% Initialize tsg structure with tsg_preference function
% -----------------------------------------------------
tsg_preferences(hMainFig, tsgqcname, DEFAULT_PATH_FILE);

% Retrieve named application data
% -------------------------------
tsg = getappdata( hMainFig, 'tsg_data');

%%  Menu File
%   -----------------------------------------------------------------------
hFileMenu = uimenu(...
  'Parent', hMainFig,...
  'HandleVisibility', handleVisibility,...
  'Label', 'File');
hOpenMenu = uimenu(...
  'Parent', hFileMenu,...
  'Label','Open',...
  'Accelerator','O',...
  'HandleVisibility', handleVisibility,...
  'UserData', 'off',...
  'Callback', @OpenMenuCallback);
hSaveMenu = uimenu(...
  'Parent', hFileMenu,...
  'Label','Save',...
  'Accelerator','S',...
  'Enable', 'off',...
  'UserData', 'off',...
  'HandleVisibility', handleVisibility,...
  'Callback',@SaveMenuCallback);
hExportMenu = uimenu(...
  'Parent', hFileMenu,...
  'Label','Export',...
  'Accelerator','E',...
  'Enable', 'off',...
  'UserData', 'off',...
  'HandleVisibility', handleVisibility,...
  'Callback',@ExportMenuCallback);
hQuitMenu = uimenu(...
  'Parent',hFileMenu,...
  'Label','Quit',...
  'Separator','on',...
  'Accelerator','Q',...
  'HandleVisibility', handleVisibility,...
  'Callback',@QuitMenuCallback);

%%  Menu Edit with Undo/Redo submenu 
% ---------------------------------
hEditMenu = uimenu(hMainFig,'Label','Edit');
uimenu(hEditMenu,'Label','Undo',...
  'Accelerator','Z',...
  'Tag','UIMENU_UNDO',...
  'Enable', 'off',...
  'Callback',@UndoMenuCallback);
uimenu(hEditMenu,'Label','Redo',...
  'Accelerator','R',...
  'Tag','UIMENU_REDO',...
  'Enable', 'off',...
  'Callback',@RedoMenuCallback);

%%  Menu Climatology with Annual/Seasonal/Monthly submenu
% --------------------------------------------------------

% define structure s stored in userdata
% -------------------------------------
s = struct('type', 'annual', 'time', 1);

hClimatoMenu = uimenu(hMainFig,'Label','Climatology', ...
  'Tag', 'TAG_UIMENU_CLIMATO_MAIN', ...
  'UserData', s);

% by defautl at startup, select climatology to annual
% ---------------------------------------------------
uimenu(hClimatoMenu,'Label','Annual',...
201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687
  'Checked','on',...
  'Tag','TAG_UIMENU_CLIMATO_ANNUAL',...
  'Enable', 'on',...
  'Callback', {@ClimatoSelectMenuCallback, 'annual', 1});

% declare top-level seasonal menu
% -------------------------------
hClimatoSeasonalMenu = uimenu(hClimatoMenu,'Label','Seasonal');

% declare label for seasonal submenu
% ----------------------------------
label = {'jan-feb-mar','apr-may-jun','jul-aug-sept','oct-nov-dec'};

% loop over the four submenu
% --------------------------
for i=1:4
uimenu(hClimatoSeasonalMenu,'Label',label{i},...
  'Checked','off',...
  'Tag',['TAG_UIMENU_CLIMATO_SEASONAL_' i],...
  'Enable', 'on',...
  'Callback',{@ClimatoSelectMenuCallback, 'seasonal', i});
end

% declare top-level monthly menu
% -------------------------------
hClimatoMonthlyMenu = uimenu(hClimatoMenu,'Label','Monthly');

% declare label for monthly submenu
% ----------------------------------
label = {'january','february','march','april','may','june','july','august',...
         'september','october','november','december'};

% loop over the four submenu
% --------------------------
for i=1:12
uimenu(hClimatoMonthlyMenu,'Label',label{i},...
  'Checked','off',...
  'Tag',['TAG_UIMENU_CLIMATO_MONTHLY_' i],...
  'Enable', 'on',...
  'Callback',{@ClimatoSelectMenuCallback, 'monthly', i});
end


%%  Menu Option with Preferences submenu
% --------------------------------------------------------
hOptionMenu = uimenu(hMainFig,'Label','Option');
uimenu(hOptionMenu,'Label','Preferences',...
  'Checked', tsg.preference.autoload,...
  'Tag','TAG_UIMENU_OPTION_PREFERENCES',...
  'Enable', 'on',...
  'Callback', {@PreferencesMenuCallback});

%%  Toolbar pushbuttons
%   -----------------------------------------------------------------------
hToolbar       =   uitoolbar(...   % Toolbar for Open and Print buttons
  'Parent',hMainFig, ...
  'HandleVisibility','on');
hOpenPushtool  =   uipushtool(...   % Opendoc toolbar button
  'Parent',hToolbar,...
  'TooltipString','Open file',...
  'CData', iconRead(fullfile(matlabroot, ...
  '/toolbox/matlab/icons/opendoc.mat')),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_OPEN',...
  'UserData', 'off',...
  'Enable', 'on',...
  'ClickedCallback', @OpenMenuCallback);
hSavePushtool  =   uipushtool(...   % Open Save toolbar button
  'Parent',hToolbar,...
  'TooltipString','Save NetCDF file',...
  'CData',iconRead( ...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'savedoc.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_SAVE',...
  'Enable', 'off',...
  'ClickedCallback', @SaveMenuCallback);
hPrintFigPushtool  =   uipushtool(...   % Open Save toolbar button
  'Parent',hToolbar,...
  'TooltipString','Print figures',...
  'CData',iconRead( ...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'printdoc.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_PRINTFIG',...
  'Enable', 'off',...
  'ClickedCallback', @PrintFigMenuCallback);
hZoomToggletool  =   uitoggletool(...   % Open Zoom toolbar button
  'Parent',hToolbar,...
  'Separator', 'on', ...
  'TooltipString','Zoom',...
  'CData', iconRead(fullfile(matlabroot, ...
  '/toolbox/matlab/icons/zoom.mat')),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_ZOOM',...
  'Enable', 'off',...
  'OffCallback', @Zoom_OffMenuCallback,...
  'ONCallback',  @Zoom_OnMenuCallback);
hPanToggletool  =   uitoggletool(...   % Open Pan toolbar button
  'Parent',hToolbar,...
  'TooltipString','Pan',...
  'CData',iconRead(fullfile(matlabroot, ...
  '/toolbox/matlab/icons/pan.mat')),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_PAN',...
  'Enable', 'off',...
  'OffCallback', @Pan_OffMenuCallback,...
  'OnCallback',  @Pan_OnMenuCallback);
hQCToggletool  =   uitoggletool(...   % Open QC toolbar button
  'Parent',hToolbar,...
  'TooltipString','Validation codes',...
  'Separator', 'on', ...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'qcicon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_QC',...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @QC_OffMenuCallback,...
  'OnCallback',  @QC_OnMenuCallback);
hTimelimitToggletool  = uitoggletool(...   
  'Parent',hToolbar,...
  'TooltipString','Select time limit',...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'selecttime.mat']),...
  'HandleVisibility','on', ...
  'Tag', 'CORRECT_STARTTIME', ...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @SelectTime_OffMenuCallback,...
  'OnCallback',  @SelectTime_OnMenuCallback);
hMapToggletool  =   uitoggletool(...   % Open Map toolbar button
  'Parent',hToolbar,...
  'TooltipString','Map and ship track',...
  'Separator', 'on', ...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'mapicon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_MAP',...
  'UserData', 'off', ...
  'Enable', 'off',...
  'OffCallback', @Map_OffMenuCallback,...
  'OnCallback',  @Map_OnMenuCallback);
hClimToggletool  =   uitoggletool(...   % Open Climatology toolbar button
  'Parent',hToolbar,...
  'TooltipString','Climatology',...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'climicon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_CLIM',...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @Clim_OffMenuCallback,...
  'OnCallback',  @Clim_OnMenuCallback);
hCalToggletool  =   uitoggletool(...   % 
  'Parent',hToolbar,...
  'TooltipString','Calibration sensors',...
  'Separator', 'on', ...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'outils.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_CAL',...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @Cal_OffMenuCallback,...
  'OnCallback',  @Cal_OnMenuCallback);
hInterpToggletool  =   uitoggletool(...   % 
  'Parent',hToolbar,...
  'TooltipString','Interpolate missing position',...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'interp.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_INTERP',...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @Inter_OffMenuCallback,...
  'OnCallback',  @Inter_OnMenuCallback);
hBottleToggletool  = uitoggletool(...   % Correction module toolbar button
  'Parent',hToolbar,...
  'TooltipString','Correct the SSS TSG data',...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'bottleicon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_BOTTLE',...
  'UserData', 'off',...
  'Enable', 'off',...
  'OffCallback', @Bottle_OffMenuCallback,...
  'OnCallback',  @Bottle_OnMenuCallback);

hHeaderPushtool  = uipushtool(...   % Open headerForm button
  'Parent',hToolbar,...
  'TooltipString','Fill the header form',...
  'Separator', 'on', ...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'hdricon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_HEADER',...
  'Enable', 'off',...
  'ClickedCallback', @HeaderMenuCallback);

hReportPushtool  = uipushtool(...   % Open Report saving button
  'Parent',hToolbar,...
  'TooltipString','Save a report',...
  'CData',iconRead(...
  [DEFAULT_PATH_FILE 'tsg_icon' filesep 'reporticon.mat']),...
  'HandleVisibility','on', ...
  'Tag','PUSHTOOL_REPORT',...
  'Enable', 'off',...
  'ClickedCallback', @ReportMenuCallback);

%% Dynamic text area
%   -----------------------------------------------------------------------
%  Dynamic text area that displays the loaded filename, date, position and
%  salinity, temperature
%  ------------------------------------------------------------------------

% Create an uipanel
% -----------------
hInfoPanel = uipanel( ...
  'Parent', hMainFig, ...
  'Units', 'normalized', ...
  'BorderType', 'none',...
  'Visible', 'on', ...
  'Position',[.01, .96, .98, .04]);

% Dynamic text area that displays the date
% ----------------------------------------
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.01, .25, .04, .6], ...
  'String', 'File:');
hInfoFileText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'No file loaded', ...
  'Position', [.05, .25, .1, .6]);

% Text area that displays the date
% --------------------------------
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.15, .25, .04, .6], ...
  'String', 'Date:');
hInfoDateText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.20, .25, .13, .6]);

% Text area that displays the latitude
% ------------------------------------
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.33, .25, .06, .6], ...
  'String', 'Latitude:');
hInfoLatText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.4, .25, .9, .6]);

% Text area that displays the longitude
% -------------------------------------
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.495, .25, .08, .6], ...
  'String', 'Longitude:');
hInfoLongText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.585, .25, .09, .6]);

% Text area that display salinity and temperature
% -----------------------------------------------
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position', [.68, .25, .05, .6], ...
  'String', 'SSPS:');
hInfoSSPSText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.73, .25, .05, .6]);
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.785, .25, .05, .6], ...
  'String', 'SSJT:');
hInfoSSJTText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.835, .25, .05, .6]);
uicontrol(...
  'Parent', hInfoPanel, ...
  'Units', 'normalized', ...
  'Style', 'Text', ...
  'Fontsize', tsg.fontSize, ...
  'Fontweight', 'bold', ...
  'HorizontalAlignment', 'left', ...
  'Position',[.89, .25, .05, .6], ...
  'String', 'SSTP:');
hInfoSSTPText = uicontrol(...
  'Parent', hInfoPanel, ...
  'Style', 'text', ...
  'Fontsize', tsg.fontSize, ...
  'Visible','on',...
  'Units', 'normalized',...
  'HorizontalAlignment', 'left', ...
  'String', 'N/A', ...
  'Position', [.94, .25, .05, .6]);

%% Plot axes
%   -----------------------------------------------------------------------
% The axes 1,2 and 3 will be plot in a uipanel
% axe 1 as propertie 'HandleVisibility' set to 'on' to prevent hidden 
% visibility when first plot is empty
%--------------------------------------------------------------------
hPlotsPanel = uipanel( ...
  'Parent', hMainFig, ...
  'Units', 'normalized', ...
  'BorderType', 'etchedin',...
  'Visible', 'on',...
  'Position',[0.15, 0.0, .85, .95]); 
hPlotAxes(1) = axes( 'Parent', hPlotsPanel, 'Visible', 'off', ...
  'box', 'on', 'Units', 'normalized','Tag', 'TAG_AXES_1', ...
  'HandleVisibility','on', 'Position',[.05, .64, .93, .35]);
hPlotAxes(2) = axes( 'Parent', hPlotsPanel, 'Visible', 'off',...
  'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_2', ...
  'HandleVisibility','on', 'Position',[.05, .33, .93, .27]);
hPlotAxes(3) = axes('Parent', hPlotsPanel, 'Visible', 'off',...
  'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_3', ...
  'HandleVisibility','on', 'Position',[.05, .02, .93, .27]);

% The map will be plot in a uipanel
hMapPanel = uipanel( ...
  'Parent', hMainFig, ...
  'Units', 'normalized', ...
  'Visible', 'off', ...
  'Position',[0.15, 0, .85, .58]);
hPlotAxes(4) = axes(...     % the axes for plotting ship track map
  'Parent', hMapPanel, ...
  'Units', 'normalized', ...
  'Visible', 'off', ...
  'Tag', 'TAG_AXES_MAP', ...  
  'Color', 'none', ...
  'UserData', 'off', ...
  'HandleVisibility','on', ...
  'Position',[.05, .05, .9, .9]);

%% uipanel for Quality Control Buttons - uibutton group 
%   -----------------------------------------------------------------------
hbgQc = uibuttongroup(...
  'Parent', hMainFig, ...
  'Title', 'Validation Codes', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'tag', 'TAG_QC_DISPLAY_PANEL',...
  'HandleVisibility','on',...
  'Visible', 'off',...
  'BorderType', 'etchedin',...
  'Units', 'normalized', 'Position', [.0, .71, .15, .25]);

% Initialize CallBack for button group properties
% ----------------------------------------------- 
set(hbgQc,'SelectionChangeFcn',@RadiobuttonQc);

%% Context Menu and RadioButtons for Quality control
%   -----------------------------------------------------------------------
hQcCmenu = uicontextmenu(...
  'Parent', hMainFig, ...
  'HandleVisibility','on' );

% get list of keys from hashtable tsg.qc.hash, defined inside
% tsg_initialisation.m
% -----------------------------------------------------------
qc_list = get(tsg.qc.hash);

% internal loop count with state to on
% ------------------------------------
count = 0;

% iterate (loop) on each key store inside hastable
% ------------------------------------------------
for i=1:numel(qc_list)
  
  % get key and some values in hashtable
  % ------------------------------------
  key   = qc_list{i};
  label = get(tsg.qc.hash, key, 'label');
  color = get(tsg.qc.hash, key, 'color');
  state = get(tsg.qc.hash, key, 'state');
  
  % construct context menu with only code set to 'on' (valid)
  % ---------------------------------------------------------
  if strcmp( state, 'on')
    
    % add menu to hQcCmenu uicontextmenu
    % ----------------------------------
    uimenu(...
      'Parent', hQcCmenu,...
      'HandleVisibility','on', ...
      'Label', label,...
      'ForegroundColor', color,...
      'Callback', {@Qc, key});
    
    % add button QC to hbgQc uibuttongroup
    % ------------------------------------
    uicontrol(...
      'Parent', hbgQc,...
      'Style', 'radiobutton',...
      'Fontsize', tsg.fontSize-1, 'ForegroundColor', color,...
      'HorizontalAlignment', 'left', ...
      'HandleVisibility','on', ...
      'String', label,...
      'Tag', ['TAG_QC_RADIO_' key], ...
      'Units', 'normalized', 'Position', [.01, .85-count*.12, .6, 0.09]);
    
    % add text QC display statistic on hQcPanel
    % -----------------------------------------
    uicontrol(...
      'Parent', hbgQc,...
      'Style', 'text',...
      'Fontsize', tsg.fontSize-1, 'ForegroundColor', color,...
      'HorizontalAlignment', 'right', ...
      'HandleVisibility','on', ...
      'String', 'N/A ',...
      'Tag', ['TAG_QC_TEXT_' key],...
      'Units', 'normalized', 'Position', [.61, .85-count*.12, .37, 0.09]);
    
    % increment count
    % ---------------
    count = count + 1;
  end
end

%% uipanel for checkboxes 
%   --------------------------------------
hCorPanel = uipanel(...
  'Parent', hMainFig, ...
  'Title', 'Correction applied to ...', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'tag', 'TAG_CORRECTION_DISPLAY_PANEL',...
  'HandleVisibility','on',...
  'Visible', 'off',...
  'BorderType', 'etchedin',...
  'Units', 'normalized', 'Position', [.0, .001, .15, .25]);

% get list of keys from hashtable tsg.qc.hash, defined inside
% tsg_initialisation.m
% -----------------------------------------------------------
qc_list = get(tsg.qc.hash);

% internal loop count with state to on
% ------------------------------------
count = 0;

% iterate (loop) on each key store inside hastable
% ------------------------------------------------
for i=1:numel(qc_list)
  
  % get key and some values in hashtable
  % ------------------------------------
  key   = qc_list{i};
  label = get(tsg.qc.hash, key, 'label');
  color = get(tsg.qc.hash, key, 'color');
  state = get(tsg.qc.hash, key, 'state');
  
  value = 0;
  if strcmp(key, 'NO_CONTROL') || strcmp(key, 'GOOD') ||...
     strcmp(key, 'PROBABLY_GOOD')
   value = 1;
  end
  
  % construct context menu with only code set to 'on' (valid)
  % ---------------------------------------------------------
  if strcmp( state, 'on')
    
    % add button QC to hbgQc uibuttongroup
    % ------------------------------------  
    cbCorr(i) = uicontrol(...
      'Parent', hCorPanel, ...
      'Style', 'checkbox', ...
      'String', label, ...
      'Fontsize', tsg.fontSize-1, 'ForegroundColor', color,...
      'Value', value, ...
      'Tag',  ['TAG_CHECK_CORRECTION_' key], ...
      'HandleVisibility', 'on',...
      'Units', 'normalized', 'Position', [.01, .85-count*.12, .6, 0.09]);
    
    % increment count
    % ---------------
    count = count + 1;
  end
end

%% uibutton group panel - Choose the parameter (SSPS - SSTP - SSJT)
%   -----------------------------------------------------------------------
hbgParameter = uibuttongroup(...
  'Parent', hMainFig, ...
  'Title', 'TSG Parameter', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'tag', 'TAG_PARA_DISPLAY_PANEL',...
  'HandleVisibility','on',...
  'Visible', 'off',...
  'BorderType', 'etchedin',...
  'Units', 'normalized', 'Position', [.0, .81, .15, .15]);

para    = [ 'SSPS'; 'SSJT'; 'SSTP' ];
strPara = [ ['Salinity ' para(1,:) '   ']; ...
            ['Temperature ' para(2,:)]; ...
            ['Temperature ' para(3,:)] ];  
for i = 1:3

  % add button QC to hbgParameter uibuttongroup
  % -------------------------------------------
  uicontrol(...
    'Parent', hbgParameter,...
    'Style', 'radiobutton',...
    'Fontsize', tsg.fontSize-1, 'ForegroundColor', color,...
    'HorizontalAlignment', 'left', ...
    'HandleVisibility','on', ...
    'String', strPara(i, :),...
    'Tag', ['TAG_PARA_RADIO_' para(i,:)], ...
    'Units', 'normalized', 'Position', [.05, .8-(i-1)*.30, .90, 0.12]);

end

% Initialize CallBack for button group properties
% ----------------------------------------------- 
set(hbgParameter,'SelectionChangeFcn',@RadiobuttonParameter);


%% uiButtonGroup set to choose the Correction method
% -------------------------------------------------------------------------

% Create the button group
hbgCorMethod = uibuttongroup( ...
  'Parent',hMainFig, ...
  'Title','Correction Method', ...
  'Units', 'normalized', ...
  'FontSize',tsg.fontSize-1, 'Fontweight', 'bold',...
  'Visible', 'off', ...
  'Position',[.0, .29, .15, .18]);

% Create 2 radio buttons in the button group
hrbCorCancel = uicontrol( ...
  'Style','pushbutton', ...
  'Parent',hbgCorMethod, ...
  'Units', 'normalized', ...
  'String','Cancel the adjustment',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'CORRECT_CANCEL_PUSH', ...
  'pos',[.05 .08 .9 .25],...
  'HandleVisibility', handleVisibility, ...
  'Callback', @CorCancelCallback);
hrbCorLinear = uicontrol( ...
  'Style','pushbutton', ...
  'Parent',hbgCorMethod, ...
  'Units', 'normalized', ...
  'String','Linear adjustment',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'CORRECT_LINEAR_PUSH', ...
  'pos',[.05 .38 .9 .25], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @CorLinearCallback);
hrbCorMedian = uicontrol( ...
  'Style','pushbutton', ...
  'Parent',hbgCorMethod, ...
  'Units', 'normalized', ...
  'String','Running median filter',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'CORRECT_MEDIAN_PUSH', ...
  'pos',[.05 .68 .9 .25], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @CorMedianCallback);

%% uiPanel for the Date limits used in the Correction module

% Choose the date limits for the correction
% --------------------------------------------------
% Create the uipanel
hpDateLimit = uipanel( ...
  'Parent', hMainFig, ...
  'Title', 'Date Limits', ...
  'Units', 'normalized', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'Visible', 'off', ...
  'Position', [.0, .5, .15, .18]);

htDateMin = uicontrol( ...
  'Parent', hpDateLimit, ...
  'Style', 'Text', ...
  'String', 'Min : yyyy-mm-dd hh:mm:ss', ...
  'HorizontalAlignment', 'left', ...
  'Units', 'normalized', ...
  'FontSize', tsg.fontSize-1, ...
  'Position',[.01 .8 .95 .15]);
hetDateMin = uicontrol( ...
  'Parent', hpDateLimit, ...
  'Style', 'edit', ...
  'Units', 'normalized', ...
  'BackgroundColor', 'white',...
  'FontSize', tsg.fontSize, ...
  'Tag', 'CORRECT_DATEMIN_EDIT',...
  'Position',[.01 .6 .95 .17]);

htDateMax = uicontrol( ...
  'Parent', hpDateLimit, ...
  'Style', 'Text', ...
  'String', 'Max : yyyy-mm-dd hh:mm:ss', ...
  'HorizontalAlignment', 'left', ...
  'Units', 'normalized', ...
  'FontSize', tsg.fontSize-1, ...
  'Position',[.01 .35 .95 .15]);
hetDateMax = uicontrol( ...
  'Parent', hpDateLimit, ...
  'Style', 'edit', ...
  'Units', 'normalized', ...
  'BackgroundColor', 'white',...
  'FontSize', tsg.fontSize, ...
  'Tag', 'CORRECT_DATEMAX_EDIT',...
  'Position',[.01 .15 .95 .17]);

%% uiPanel for the Calibration coefficient used the Correction module

% Create the uipanel
hpCalCoef = uipanel( ...
  'Parent', hMainFig, ...
  'Title', 'Calibration', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'Visible', 'off', ...
  'Units', 'normalized','Position', [.0, .46, .15, .50]);

 htCalCNDC1 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'Conductivity : C = A*C + B', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .925 .95 .05]);
 htCalCNDC2 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'A', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .85 .08 .05]);
 hetCalCNDCSlope = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'FontSize', tsg.fontSize, 'BackgroundColor', 'white',...
   'Tag', 'CORRECT_CAL_CNDC_A',...
   'HandleVisibility','on', ...
   'Units', 'normalized', 'Position',[.1 .85 .85 .05]);
 htCalCNDC3 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'B', ...
   'HorizontalAlignment', 'left',  'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .775 .08 .05]);
 hetCalCNDCOffset = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'FontSize', tsg.fontSize, 'BackgroundColor', 'white',...
   'HandleVisibility','on', ...
   'Tag', 'CORRECT_CAL_CNDC_B',...
   'Units', 'normalized', 'Position',[.1 .775 .85 .05]);

 htCalSSJT1 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'SSJT : T = A*T + B', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .675 .95 .05]);
 htCalSSJT2 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'A', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .6 .08 .05]);
 hetCalSSJTSlope = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'BackgroundColor', 'white',...
   'FontSize', tsg.fontSize, ...
   'HandleVisibility','on', ...
   'Tag', 'CORRECT_CAL_SSJT_A',...
   'Units', 'normalized', 'Position',[.1 .6 .85 .05]);
 htCalSSJT3 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'B', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .525 .08 .05]);
 hetCalSSJTOffset = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'FontSize', tsg.fontSize, 'BackgroundColor', 'white',...
   'HandleVisibility','on', ...
   'Tag', 'CORRECT_CAL_SSJT_B',...
   'Units', 'normalized', 'Position',[.1 .525 .85 .05]);

 htCalSSTP1 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'SSPT : T = A*T + B', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .425 .95 .05]);
 htCalSSTP2 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'A', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .35 .08 .05]);
 hetCalSSTPSlope = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'BackgroundColor', 'white',...
   'FontSize', tsg.fontSize, ...
   'HandleVisibility','on', ...
   'Tag', 'CORRECT_CAL_SSJT_A',...
   'Units', 'normalized', 'Position',[.1 .35 .85 .05]);
 htCalSSTP3 = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'Text', 'String', 'B', ...
   'HorizontalAlignment', 'left', 'FontSize', tsg.fontSize-1, ...
   'Units', 'normalized', 'Position',[.01 .275 .08 .05]);
 hetCalSSTPOffset = uicontrol( ...
   'Parent', hpCalCoef, ...
   'Style', 'edit', ...
   'FontSize', tsg.fontSize, 'BackgroundColor', 'white',...
   'HandleVisibility','on', ...
   'Tag', 'CORRECT_CAL_SSJT_B',...
   'Units', 'normalized', 'Position',[.1 .275 .85 .05]);

 hrbCal = uicontrol( ...
  'Style','pushbutton', 'Parent',hpCalCoef, ...
  'String','Calibrate',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'CORRECT_CAL_PUSH', ...
  'Units', 'normalized','pos',[.05 .15 .9 .075], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @CalibrateCallback);
 hrbCancelCal = uicontrol( ...
  'Style','pushbutton', 'Parent',hpCalCoef, ...
  'String','Cancel calibration',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'CORRECT_CAL_PUSH', ...
  'Units', 'normalized','pos',[.05 .05 .9 .075], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @CancelCalibrationCallback);


%% uiPanel for Interpolation of position

% Create the uipanel
hpInterpPos = uipanel( ...
  'Parent', hMainFig, ...
  'Title', 'Lat-Lon interpolation', ...
  'FontSize', tsg.fontSize-1, 'Fontweight', 'bold', ...
  'Visible', 'off', ...
  'Units', 'normalized','Position', [.0, .75, .15, .21]);
hrbInterpLinear = uicontrol( ...
  'Style','pushbutton', 'Parent',hpInterpPos, ...
  'String','Linear interpolation',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'TAG_PUSH_INTERP_LINEAR', ...
  'Units', 'normalized','pos',[.05 .65 .9 .25], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @InterpPosLinearCallback);
hrbInterpOther = uicontrol( ...
  'Style','pushbutton', 'Parent',hpInterpPos, ...
  'String','Other method',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'TAG_PUSH_INTERP_OTHER', ...
  'Units', 'normalized','pos',[.05 .35 .9 .25], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @InterpPosOtherCallback);
hrbInterpCancel = uicontrol( ...
  'Style','pushbutton', 'Parent',hpInterpPos, ...
  'String','Cancel interpolation',...
  'FontSize',tsg.fontSize-1,...
  'Tag', 'TAG_PUSH_INTERP_CANCEL', ...
  'Units', 'normalized','pos',[.05 .05 .9 .25], ...
  'HandleVisibility', handleVisibility, ...
  'Callback', @InterpPosCancelCallback);


%% test if user preference autoload field is checked (on)
% -------------------------------------------------------
if strcmp(tsg.preference.autoload, 'on')
  
  % A TSG file has been open and read
  % ---------------------------------
  set( hOpenMenu, 'UserData', 'on' );

  % Show handles marked as hidden with HandleVisibility property set to
  % callback or off
  % -------------------------------------------------------------------
  set(0, 'ShowHiddenHandles', 'on');
  
  % enable toolbar menu pushtool
  % ----------------------------
  hdl_pushtool = findobj('-regexp','Tag', 'PUSHTOOL_');
  set(hdl_pushtool, 'Enable', 'on');

  % enable Save menu
  % ----------------
  set(hSaveMenu, 'Enable', 'on');

  % update the filename display
  % ---------------------------
  set( hInfoFileText, 'String', strcat(tsg.file.name, tsg.file.ext));

  % update some fields in tsg structure
  % -----------------------------------
  updateTsgStruct( hMainFig );

  % Get application data for the test
  % ---------------------------------
  tsg = getappdata( hMainFig, 'tsg_data');
  
  % Get the default parameter
  % -------------------------
  PARA = tsg.preference.parameter;
  
  % The smooth TSG time series (tsg_moveaverage) is
  % no more computed : too long
  % We now computed a smooth value only at the position of the sample
  % in diffTsgSample
  % -----------------------------------------------------------------
  %tsg_moveaverage( hMainFig, PARA );

  % Merge sample from different origins : WS and EXT
  % ------------------------------------------------
  tsg_mergesample( hMainFig, PARA );
  
  % Draw the 3 plots of the validation figure
  % The plots need to be re-initialize because of a bug with
  % the zoom function. When you open a new TSG file and you
  % have used the zoom funtion with the preceding file.
  % The zoom function keep the X and Y limits of the preceding file
  % ---------------------------------------------------------------
  delete( hPlotAxes(1) );
  delete( hPlotAxes(2) );
  delete( hPlotAxes(3) );

  hPlotAxes(1) = axes( 'Parent', hPlotsPanel, 'Visible', 'off', ...
    'box', 'on', 'Units', 'normalized','Tag', 'TAG_AXES_1', ...
    'HandleVisibility','on', 'Position',[.05, .64, .93, .35]);
  hPlotAxes(2) = axes( 'Parent', hPlotsPanel, 'Visible', 'off',...
    'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_2', ...
    'HandleVisibility','on', 'Position',[.05, .33, .93, .27]);
  hPlotAxes(3) = axes('Parent', hPlotsPanel, 'Visible', 'off',...
    'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_3', ...
    'HandleVisibility','on', 'Position',[.05, .02, .93, .27]);
  
  resetAxes( hMainFig, hPlotAxes );
  
  plot_Validation( hMainFig, hPlotAxes, 1, PARA );
  plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
  plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );
 
  % Draw the map with the ship track
  % --------------------------------
  plot_map( hMainFig, hPlotAxes);

  % The callback to detect the mouse motion can be set to on
  % --------------------------------------------------------
  set( hMainFig, 'UserData', 'ButtonMotionOn');

  % Hide handles marked as hidden with HandleVisibility property set to
  % callback or off
  % -------------------------------------------------------------------
  set(0, 'ShowHiddenHandles', 'off');
  
end


%% *************************** CALLBACKS **********************************

%% OpenMenuCallback
  %----------------------------------------------------------------------
  % Callback function run when the Open menu item is selected
  %----------------------------------------------------------------------
  function OpenMenuCallback(hObject, eventdata)
      
    % Activate or desactivate uipanels
    % --------------------------------
    set( hpCalCoef,            'Visible', 'off' );
    set( hpDateLimit,          'Visible', 'off' );
    set( hpInterpPos,          'Visible', 'off' );
%    set( hbgParameter,         'Visible', 'off');
    
    % Toggle button
    % -------------
    set( hBottleToggletool,    'state', 'off' );
    set( hCalToggletool,       'state', 'off' );
    set( hClimToggletool,      'state', 'off' );
    set( hInterpToggletool,    'state', 'off' );
    set( hPanToggletool,       'state', 'off' );
    set( hQCToggletool,        'state', 'off' );
    set( hTimelimitToggletool, 'state', 'off' );
    set( hZoomToggletool,      'state', 'off' );
    
    set( hHeaderPushtool,      'enable', 'off' );

    % Open standard dialog box for retrieving files
    % ---------------------------------------------
    [fileName, pathname, filterIndex] = uigetfile( ...
      {'*.nc';'*.tsg';'*.xml';'*.lbv';'*.btl'; '*.arg'}, 'Pick a file');

    % flushes the event queue and updates the closed uigetfile window
    % ---------------------------------------------------------------
     drawnow;
    
    % if the user clicks the Cancel button or closes the dialog window, 
    % FileName and PathName are set to 0.
    % -----------------------------------------------------------------
    if ~isequal(fileName, 0)
      
      % Pointer set to watch during reading and plotting
      % ------------------------------------------------
      set( hMainFig, 'Pointer', 'watch' );

      % construct valid and full file path
      % -----------------------------------
      fullFileName = strcat(pathname, fileName);

      % Read the data
      % -------------
      errTsg = -2;
      errSpl = -2;
      switch filterIndex

        case 1                      % read TSG netcdf file *.nc
          tsg_initialisation(hMainFig);
          errTsg = readTsgDataNetCDF(  hMainFig, fullFileName );
        
        case 2                      % read  TSG text file *.tsg
          tsg_initialisation(hMainFig);
          errTsg = readTsgDataTsg( hMainFig, fullFileName);
          %errTsg = readTsgDataTxt(     hMainFig, fullFileName );

        case 3                      % read TSG XML file *.xml
1188 1189 1190 1191 1192 1193 1194 1195 1196 1197 1198 1199 1200 1201 1202 1203 1204 1205 1206 1207 1208 1209 1210 1211 1212 1213 1214 1215 1216 1217 1218 1219 1220 1221 1222 1223 1224 1225 1226 1227 1228 1229 1230 1231 1232 1233 1234 1235 1236 1237 1238 1239 1240 1241 1242 1243 1244 1245 1246 1247 1248 1249 1250 1251 1252 1253 1254 1255 1256 1257 1258 1259 1260 1261 1262 1263 1264 1265 1266 1267 1268 1269 1270 1271 1272 1273 1274 1275 1276 1277 1278 1279 1280 1281 1282 1283 1284 1285 1286 1287 1288 1289 1290 1291 1292 1293 1294 1295 1296 1297 1298 1299 1300 1301 1302 1303 1304 1305 1306 1307 1308 1309 1310 1311 1312 1313 1314 1315 1316 1317 1318 1319 1320 1321 1322 1323 1324 1325 1326 1327 1328 1329 1330 1331 1332 1333 1334 1335 1336 1337 1338 1339 1340 1341 1342 1343 1344 1345 1346 1347 1348 1349 1350 1351 1352 1353 1354 1355 1356 1357 1358 1359 1360 1361 1362 1363 1364 1365 1366 1367 1368 1369 1370 1371 1372 1373 1374 1375 1376 1377 1378 1379 1380 1381 1382 1383 1384 1385 1386 1387 1388 1389 1390 1391 1392 1393 1394 1395 1396 1397 1398 1399 1400 1401 1402 1403 1404 1405 1406 1407 1408 1409 1410 1411 1412 1413 1414 1415 1416 1417 1418 1419 1420 1421 1422 1423 1424 1425 1426 1427 1428 1429 1430 1431 1432 1433 1434 1435 1436 1437 1438 1439 1440 1441 1442 1443 1444 1445 1446 1447 1448 1449 1450 1451 1452 1453 1454 1455 1456 1457 1458 1459 1460 1461 1462 1463 1464 1465 1466 1467 1468 1469 1470 1471 1472 1473 1474 1475 1476 1477 1478 1479 1480 1481 1482 1483 1484 1485 1486 1487 1488 1489 1490 1491 1492 1493 1494 1495 1496 1497 1498 1499 1500 1501 1502 1503 1504 1505 1506 1507 1508 1509 1510 1511 1512 1513 1514 1515 1516 1517 1518 1519 1520 1521 1522 1523 1524 1525 1526 1527 1528 1529 1530 1531 1532 1533 1534 1535 1536 1537 1538 1539 1540 1541 1542 1543 1544 1545 1546 1547 1548 1549 1550 1551 1552 1553 1554 1555 1556 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 1567 1568 1569 1570 1571 1572 1573 1574 1575 1576 1577 1578 1579 1580 1581 1582 1583 1584 1585 1586 1587 1588 1589 1590 1591 1592 1593 1594 1595 1596 1597 1598 1599 1600 1601 1602 1603 1604 1605 1606 1607 1608 1609 1610 1611 1612 1613 1614 1615 1616 1617 1618 1619 1620 1621 1622 1623 1624 1625 1626 1627 1628 1629 1630 1631 1632 1633 1634 1635 1636 1637 1638 1639 1640 1641 1642 1643 1644 1645 1646 1647 1648 1649 1650 1651 1652 1653 1654 1655 1656 1657 1658 1659 1660 1661 1662 1663 1664 1665 1666 1667 1668 1669 1670 1671 1672 1673 1674 1675 1676 1677 1678 1679 1680 1681 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 1693 1694 1695 1696 1697 1698 1699 1700 1701 1702 1703 1704 1705 1706 1707 1708 1709 1710 1711 1712 1713 1714 1715 1716 1717 1718 1719 1720 1721 1722 1723 1724 1725 1726 1727 1728 1729 1730 1731 1732 1733 1734 1735 1736 1737 1738 1739 1740 1741 1742 1743 1744 1745 1746 1747 1748 1749 1750 1751 1752 1753 1754 1755 1756 1757 1758 1759 1760 1761 1762 1763 1764 1765 1766 1767 1768 1769 1770 1771 1772 1773 1774 1775 1776 1777 1778 1779 1780 1781 1782 1783 1784 1785 1786 1787 1788 1789 1790 1791 1792 1793 1794 1795 1796 1797 1798 1799 1800 1801 1802 1803 1804 1805 1806 1807 1808 1809 1810 1811 1812 1813 1814 1815 1816 1817 1818 1819 1820 1821 1822 1823 1824 1825 1826 1827 1828 1829 1830 1831 1832 1833 1834 1835 1836 1837 1838 1839 1840 1841 1842 1843 1844 1845 1846 1847 1848 1849 1850 1851 1852 1853 1854 1855 1856 1857 1858 1859 1860 1861 1862 1863 1864 1865 1866 1867 1868 1869 1870 1871 1872 1873 1874 1875 1876 1877 1878 1879 1880 1881 1882 1883 1884 1885 1886 1887 1888 1889 1890 1891 1892 1893 1894 1895 1896 1897 1898 1899 1900 1901 1902 1903 1904 1905 1906 1907 1908 1909 1910 1911 1912 1913 1914 1915 1916 1917 1918 1919 1920 1921 1922 1923 1924 1925 1926 1927 1928 1929 1930 1931 1932 1933 1934 1935 1936 1937 1938 1939 1940 1941 1942 1943
          tsg_initialisation(hMainFig);
          errTsg = readTsgDataXML(     hMainFig, fullFileName );
          
        case 4                      % read TSG labview file *.lbv          
          tsg_initialisation(hMainFig);
          errTsg = readTsgDataLabview( hMainFig, fullFileName );

        case 5                      % Read bucket file *.btl
          if ~isempty( tsg.SSPS )
            errSpl = readBucketData(     hMainFig, fullFileName );
          else
            msgbox( 'Load a TSG file before a Water sample file', 'Read Bucket');
          end

        case 6                       % Read Argo file *.arg (G. Reverdin format)
          if ~isempty( tsg.SSPS )
            errSpl = readCoriolisData(   hMainFig, fullFileName );
          else
            msgbox( 'Load a TSG file before a Water sample file', 'Read Bucket');
          end

        otherwise

          % Reset pointer to arrow
          % ----------------------
          set( hMainFig, 'Pointer', 'arrow' );
          
          % diplay warning msgbox
          % ---------------------
          msgbox( {['Invalid TSG file: ' fileName],...
            'Please select another file'},...
            'Warning open file', 'warn', 'modal' );
          
          return;
          
      end    % switch filterIndex
      
      % Get the tsg structure
      % ---------------------
      tsg = getappdata( hMainFig, 'tsg_data');
      
      % Default parameter
      % -----------------
      PARA = tsg.preference.parameter;

      % A TSG file has been read
      % ------------------------
      if errTsg > 0
        
        % set WindowButtonMotionFcn on
        % ----------------------------
        set( hMainFig, 'WindowButtonMotionFcn', @MouseMotion);

        % A TSG file has been open and read
        % ---------------------------------
        set( hOpenMenu, 'UserData', 'on' );
        
        % enable toolbar menu pushtool
        % ----------------------------
        hdl_pushtool = findobj('-regexp','Tag', 'PUSHTOOL_');
        set(hdl_pushtool, 'Enable', 'on');
        
        set( hbgParameter, 'Visible', 'on');
        
        % Enable Save and Export menu
        % ---------------------------
        set(hSaveMenu,   'Enable', 'on');
        set(hExportMenu, 'Enable', 'on');
        
        % update some fields in tsg structure and restore tsg
        % ---------------------------------------------------
        updateTsgStruct(hMainFig );

        % update the filename display
        % ---------------------------
        set( hInfoFileText, 'String', strcat(tsg.file.name, tsg.file.ext));
        
        % The callback to detect the mouse motion can be set to on
        % --------------------------------------------------------
        set( hMainFig, 'UserData', 'ButtonMotionOn');
        
        % Update QC statistics
        % --------------------
        display_QC( hMainFig, hPlotAxes);
        
      elseif errTsg > -2
        
        % Problem to read the file or
        % Choice of parameters for Labview file canceled by the user
        % TSG structure has been reinitialize       
        % Disable toolbar menu pushtool except the open file button
        % ----------------------------------------------------------
        hdl_pushtool = findobj('-regexp','Tag', 'PUSHTOOL_');
        set(hdl_pushtool, 'Enable', 'off');
        
        set( hOpenPushtool, 'Enable', 'on' );

      end    %if errTsg > 0
      
      % Merge sample from different origins : WS and EXT
      % ------------------------------------------------
      tsg_mergesample( hMainFig, PARA );

      % Draw the 3 plots of the validation figure
      % The plots need to be re-initialize because of a bug with
      % the zoom function. When you open a new TSG file and you
      % have used the zoom funtion with the preceding file. 
      % The zoom function keep the X and Y limits of the preceding file
      % ---------------------------------------------------------------
      delete( hPlotAxes(1) );
      delete( hPlotAxes(2) );
      delete( hPlotAxes(3) );
      
      hPlotAxes(1) = axes( 'Parent', hPlotsPanel, 'Visible', 'off', ...
        'box', 'on', 'Units', 'normalized','Tag', 'TAG_AXES_1', ...
        'HandleVisibility','on', 'Position',[.05, .64, .93, .35]);
      hPlotAxes(2) = axes( 'Parent', hPlotsPanel, 'Visible', 'off',...
        'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_2', ...
        'HandleVisibility','on', 'Position',[.05, .33, .93, .27]);
      hPlotAxes(3) = axes('Parent', hPlotsPanel, 'Visible', 'off',...
        'box', 'on', 'Units', 'normalized', 'Tag', 'TAG_AXES_3', ...
        'HandleVisibility','on', 'Position',[.05, .02, .93, .27]);

      resetAxes( hMainFig, hPlotAxes )
     
      plot_Validation( hMainFig, hPlotAxes, 1, PARA );
      plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
      plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );

      % Pointer reset to arrow
      % ----------------------
      set( hMainFig, 'Pointer', 'arrow' );

    end    % if ~isequal(fileName, 0)

  end

%% Inter_OnMenuCallback ................................... Interpolation
  %----------------------------------------------------------------------
  % Callback function run when 
  %
  function Inter_OnMenuCallback( hObject, eventdata)

    % Activate or desactivate uipanels
    % --------------------------------
    set( hpDateLimit,          'Visible', 'on' );
    set( hpInterpPos,          'Visible', 'on' );
    set( hpCalCoef,            'Visible', 'off');
    set( hbgQc,                'Visible', 'off');
    set( hbgParameter,         'Visible', 'off');
    
    % Toggle button
    % -------------
    set( hBottleToggletool,    'state', 'off', 'enable', 'off');
    set( hCalToggletool,       'state', 'off', 'enable', 'off');
    set( hClimToggletool,      'state', 'off', 'enable', 'off');
    set( hPanToggletool,       'state', 'off', 'enable', 'on' );
    set( hQCToggletool,        'enable', 'off');
    set( hTimelimitToggletool, 'state', 'off', 'enable', 'on' );
    set( hZoomToggletool,      'state', 'off', 'enable', 'on' );
    
    set( hHeaderPushtool,      'enable', 'off' );
    
    % Get application data TSG
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    % Get the information on time limits of the time series
    % Write them in the uipanel
    % -----------------------------------------------------
    noNaN = tsg.DAYD(~isnan( tsg.DAYD ));
    set( hetDateMin, 'String', datestr(noNaN(1), 31));
    set( hetDateMax, 'String', datestr(noNaN(end), 31));
   
    % Draw the 3 plots of the interpolation figure 
    % --------------------------------------------
     plot_Interpolation( hMainFig, hPlotAxes, 1 );
     plot_Interpolation( hMainFig, hPlotAxes, 2 );
     plot_Interpolation( hMainFig, hPlotAxes, 3 );
    
  end

%% Inter_OffMenuCallback .................................. Interpolation
  %----------------------------------------------------------------------
  % Callback function run when 
  %
  function Inter_OffMenuCallback( hObject, eventdata)
    
    % Activate or desactivate uipanels
    % --------------------------------
    set( hpCalCoef,            'Visible', 'off' );
    set( hpDateLimit,          'Visible', 'off' );
    set( hpInterpPos,          'Visible', 'off' );
    set( hbgParameter,         'Visible', 'on'  );
    
    % Enable Pushbuttons
    % ------------------
    set( hBottleToggletool,    'state', 'off', 'enable', 'on' );
    set( hCalToggletool,       'state', 'off', 'enable', 'on'  );
    set( hClimToggletool,      'state', 'off', 'enable', 'on'  );
    set( hPanToggletool,       'state', 'off', 'enable', 'on'  );
    set( hQCToggletool,        'state', 'off', 'enable', 'on'  );
    set( hTimelimitToggletool, 'state', 'off', 'enable', 'off' );
    set( hZoomToggletool,      'state', 'off', 'enable', 'on'  );

    set( hHeaderPushtool,      'enable', 'on' );

    % Get tsg structure
    % -----------------
    tsg = getappdata( hMainFig, 'tsg_data' );
    
    % Draw the 3 plots of the validation figure 
    % -----------------------------------------
    plot_Validation( hMainFig, hPlotAxes, 1, tsg.preference.parameter );
    plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
    plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );
    
    % Set the pointer
    % ---------------
    set( hMainFig, 'Pointer', 'arrow');

  end

%% InterpLinearCallback ...............................Interpolation Linear
  %------------------------------------------------------------------------
  % Callback function run when 
  %----------------------------------------------------------------------
  function InterpPosLinearCallback( hObject, eventdata)

    % Get the time limits for the correction A TESTER
    % --------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    error = interpPosLinear( hMainFig, dateMin, dateMax );
    
    switch error

      case 1

        % Plot in the 3 axes
        % ------------------
        plot_Interpolation( hMainFig, hPlotAxes, 2 );
        plot_Interpolation( hMainFig, hPlotAxes, 3 );

      case -1
        msgbox( 'Date limits are not correct',...
          'Correction module', 'warn', 'modal');
    end


  end

%% InterpOtherCallback ...............................Interpolation OTher
  %----------------------------------------------------------------------
  % Callback function run when 
  %----------------------------------------------------------------------
  function InterpPosOtherCallback( hObject, eventdata)

    msgbox( 'Method not yet implemented', ...
            'Function InterpOtherCallback', ...
            'warn',...
            'modal' );
  end

%% InterpPosCancelCallback ..........................Cancel Interpolation
  %----------------------------------------------------------------------
  function InterpPosCancelCallback(hObject, eventdata)
    % Callback function run when
    
    % Get tsg application data
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data' );
    
    % Get NO_CONTROL and INTERPOLATED_VALUE codes
    % -------------------------------------------
    NO_CONTROL         = get(tsg.qc.hash, 'NO_CONTROL', 'code');
    INTERPOLATED_VALUE = get(tsg.qc.hash, 'INTERPOLATED_VALUE', 'code');

    if ~isempty( tsg.POSITION_QC )
      iINTERP = find(  tsg.POSITION_QC == INTERPOLATED_VALUE);
      tsg.LATX( iINTERP ) = NaN * ones( size( iINTERP), 1 );
      tsg.LONX( iINTERP ) = NaN * ones( size( iINTERP), 1 );
      tsg.POSITION_QC = [];
    end
    
    % Save tsg application data
    % --------------------------
    setappdata( hMainFig, 'tsg_data', tsg );
    
    % Refresh plots
    % -------------
    plot_Interpolation( hMainFig, hPlotAxes, 1 );
    plot_Interpolation( hMainFig, hPlotAxes, 2 );
    plot_Interpolation( hMainFig, hPlotAxes, 3 );

  end


%% Cal_OnMenuCallback ..................................... Calibration
  %----------------------------------------------------------------------
  % Callback function run when 
  %----------------------------------------------------------------------
  function Cal_OnMenuCallback( hObject, eventdata)
   
    % Activate or desactivate uipanels
    % --------------------------------
    set( hpCalCoef,         'Visible', 'on' );
    set( hbgParameter,      'Visible', 'off');
    set( hbgQc,             'Visible', 'off');
    
    % Pushbutton
    % ----------
    set( hQCToggletool,     'enable', 'off' );
    set( hClimToggletool,   'enable', 'off', 'state', 'off' );
    set( hBottleToggletool, 'enable', 'off' );
    set( hInterpToggletool, 'enable', 'off' );
    set( hHeaderPushtool,   'enable', 'off' );

    set( hPanToggletool,       'state', 'off', 'enable', 'on' );
    set( hTimelimitToggletool, 'state', 'off', 'enable', 'off' );
    set( hZoomToggletool,      'state', 'off', 'enable', 'on' );
        
    % Get tsg application data
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data' );
   
    % Draw the 3 plots of the validation figure 
    % -----------------------------------------
    plot_Calibration( hMainFig, hPlotAxes, 1, 'SSPS' );
    plot_Calibration( hMainFig, hPlotAxes, 2, 'SSJT' );
    plot_Calibration( hMainFig, hPlotAxes, 3, 'SSTP' );
    
    % Write the Cal Coef in the Editable uicontrol
    % --------------------------------------------
    set( hetCalCNDCSlope,  'String', num2str(tsg.CNDC_LINCOEF(1)));
    set( hetCalCNDCOffset, 'String', num2str(tsg.CNDC_LINCOEF(2)));
    set( hetCalSSJTSlope,  'String', num2str(tsg.SSJT_LINCOEF(1)));
    set( hetCalSSJTOffset, 'String', num2str(tsg.SSJT_LINCOEF(2)));
    set( hetCalSSTPSlope,  'String', num2str(tsg.SSTP_LINCOEF(1)));
    set( hetCalSSTPOffset, 'String', num2str(tsg.SSTP_LINCOEF(2)));

  end


%% Cal_OffMenuCallback ..................................... Calibration
  %----------------------------------------------------------------------
  % Callback function run when 
  %----------------------------------------------------------------------
  function Cal_OffMenuCallback( hObject, eventdata)
  
    % Activate or desactivate uipanels
    % --------------------------------
    set( hpCalCoef,         'Visible', 'off' );
    set( hbgParameter,      'Visible', 'on');
    
    % Enable Pushbuttons
    % ------------------
    set( hClimToggletool,   'enable', 'on' );
    set( hBottleToggletool, 'enable', 'on' );
    set( hInterpToggletool, 'enable', 'on' );
    set( hHeaderPushtool,   'enable', 'on' );
    set( hQCToggletool,        'state', 'off', 'enable', 'on'  );
    set( hPanToggletool,       'state', 'off', 'enable', 'on' );
    set( hTimelimitToggletool, 'state', 'off', 'enable', 'on' );
    set( hZoomToggletool,      'state', 'off', 'enable', 'on' );
        
    % Get tsg application data
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data' );
    
    % Save the calibration coefficient
    % --------------------------------
    tsg.CNDC_LINCOEF(1) = str2num(get( hetCalCNDCSlope,  'String'));
    tsg.CNDC_LINCOEF(2) = str2num(get( hetCalCNDCOffset, 'String'));
    tsg.SSJT_LINCOEF(1) = str2num(get( hetCalSSJTSlope,  'String'));
    tsg.SSJT_LINCOEF(2) = str2num(get( hetCalSSJTOffset, 'String'));
    tsg.SSTP_LINCOEF(1) = str2num(get( hetCalSSTPSlope,  'String'));
    tsg.SSTP_LINCOEF(2) = str2num(get( hetCalSSTPOffset, 'String'));
        
    % Save tsg application data
    % --------------------------
    setappdata( hMainFig, 'tsg_data', tsg );
    
    % Draw the 3 plots of the validation figure 
    % -----------------------------------------
    plot_Validation( hMainFig, hPlotAxes, 1, tsg.preference.parameter );
    plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
    plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );
   
  end

%% CalibrateCallback .......................................... Calibration
  function CalibrateCallback(hObject, eventdata)
    % Callback function run when
    
    % Get tsg application data
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data' );
    
    % Get the calibration coefficients. 
    % They will be used in the function calibration
    % ---------------------------------------------
    tsg.CNDC_LINCOEF(1) = str2num(get( hetCalCNDCSlope,  'String'));
    tsg.CNDC_LINCOEF(2) = str2num(get( hetCalCNDCOffset, 'String'));
    tsg.SSJT_LINCOEF(1) = str2num(get( hetCalSSJTSlope,  'String'));
    tsg.SSJT_LINCOEF(2) = str2num(get( hetCalSSJTOffset, 'String'));
    tsg.SSTP_LINCOEF(1) = str2num(get( hetCalSSTPSlope,  'String'));
    tsg.SSTP_LINCOEF(2) = str2num(get( hetCalSSTPOffset, 'String'));
        
    % Save tsg application data
    % --------------------------
    setappdata( hMainFig, 'tsg_data', tsg );

    % Calibrate the sensors
    % ---------------------
    calibration( hMainFig );
    
    % Update the Adjusted variables (SSPS - SSJT) with calibrated records
    % -------------------------------------------------------------------
    updateAdjustedVariable( hMainFig );
    
    % Refresh plot #1
    % ---------------
    plot_Calibration( hMainFig, hPlotAxes, 1, 'SSPS' );
    plot_Calibration( hMainFig, hPlotAxes, 2, 'SSJT' );
    plot_Calibration( hMainFig, hPlotAxes, 3, 'SSTP' );
    
    % As soon as a modification took place the data should be saved
    % -------------------------------------------------------------
    set( hSaveMenu, 'UserData', 'on' );

  end

%% CancelCalibrationCallback .................................. Calibration
  function CancelCalibrationCallback(hObject, eventdata)
    % Callback function run when
    
    % Get tsg application data
    % ------------------------
    tsg = getappdata( hMainFig, 'tsg_data' );
        
    % Emptied the CAL variables
    % -------------------------
    tsg.CNDC_CAL = [];
    tsg.SSPS_CAL = [];
    tsg.SSJT_CAL = [];
    tsg.SSTP_CAL = [];
    
    % Save tsg application data
    % --------------------------
    setappdata( hMainFig, 'tsg_data', tsg );
    
    % Update the Adjusted variables 
    % -----------------------------
    updateAdjustedVariable( hMainFig );
    
    % Refresh plot #1
    % ---------------
    plot_Calibration( hMainFig, hPlotAxes, 1, 'SSPS' );
    plot_Calibration( hMainFig, hPlotAxes, 2, 'SSJT' );
    plot_Calibration( hMainFig, hPlotAxes, 3, 'SSTP' );
    
    % As soon as a modification took place the data should be saved
    % -------------------------------------------------------------
    set( hSaveMenu, 'UserData', 'on' );

  end

%% Zoom_OffMenuCallback
  %----------------------------------------------------------------------
  % Callback function run when the zoom toggle toolbar is released
  %----------------------------------------------------------------------
  function Zoom_OffMenuCallback(hObject, eventdata)
    
    % turns interactive zooming off
    % -----------------------------
    zoom off;
 
    % Set the right limit and interval to the 3 axes
    % ----------------------------------------------
    for iaxe = 1:3
      set(hPlotAxes(iaxe),'XTickMode','auto')
      datetick(hPlotAxes(iaxe),'x','keeplimits')
    end
    
    % Turns off the automatic adaptation of date ticks
    % ------------------------------------------------
    zoomAdaptiveDateTicks('off');
    
  end

%% Zoom_OnMenuCallback
  %----------------------------------------------------------------------
  % Callback function run when the zoom toggle toolbar is released
  %----------------------------------------------------------------------
  function Zoom_OnMenuCallback(hObject, eventdata)
    
    % cursor back to normal
    % ---------------------
    set(hMainFig,'Pointer','arrow');
    
    % returns a zoom mode object for the figure hMainFig handle
    % --------------------------------------------------------
    hZoom = zoom(hMainFig);
    
    % Disallows a zoom operation on the MAP axes objects
    % --------------------------------------------------
    setAllowAxesZoom(hZoom, hPlotAxes(4), false);

    % turns on interactive zooming (same effect than zoom on) but prevent
    % side effect on another figure
    % -------------------------------------------------------------------
    set(hZoom, 'enable', 'on');
    %zoom on;
    
    % Turns on the automatic adaptation of date ticks
    % -----------------------------------------------
    zoomAdaptiveDateTicks('on');
 
    % Desactivate some toggle buttons
    % -------------------------------
    set( hQCToggletool,        'state', 'off' );
    set( hPanToggletool,       'state', 'off' );
    set( hTimelimitToggletool, 'state', 'off' );
   
  end

%% Pan_OffMenuCallback
  %----------------------------------------------------------------------
  % Callback function run when the pan toggle toolbar is released
  %----------------------------------------------------------------------
  function Pan_OffMenuCallback(hObject, eventdata)
    
    % turns interactive pan off
    % -------------------------
    pan off;
    
    % Set the right limit and interval to the 3 axes
    % ----------------------------------------------
    for iaxe = 1:3
      set(hPlotAxes(iaxe), 'XTickMode', 'auto')
      datetick(hPlotAxes(iaxe), 'x', 'keeplimits')
    end
 
    % Turns off the automatic adaptation of date ticks
    % ------------------------------------------------
    panAdaptiveDateTicks('off');
    
  end

%% Pan_OnMenuCallback
  %----------------------------------------------------------------------
  % Callback function run when the pan toggle toolbar is selected
  %----------------------------------------------------------------------
  function Pan_OnMenuCallback(hObject, eventdata)
    
    % cursor back to normal
    % ---------------------
    set(hMainFig, 'Pointer', 'arrow');
    
    % Returns a pan mode object for the figure handle
    % -----------------------------------------------
    hPan = pan(hMainFig);
    
    % Disallows a pan operation on the MAP axes objects
    % --------------------------------------------------
    setAllowAxesPan(hPan, hPlotAxes(4), false);

    % turns on interactive pan (same effect than pan on) but prevent
    % side effect on another figure
    % --------------------------------------------------------------
    set(hPan, 'enable', 'on');
    
    % Turns on the automatic adaptation of date ticks
    % -----------------------------------------------
    panAdaptiveDateTicks('on');
   
    % Desactivate some toggle buttons
    % -------------------------------
    set( hQCToggletool,   'state', 'off' );
    set( hZoomToggletool, 'state', 'off' );
    set( hTimelimitToggletool, 'state', 'off' );
    
  end

%% QC_OnMenuCallback ............................... Quality Control Module
  %----------------------------------------------------------------------
  % Callback function run when the QC toggle tool is pressed
  %----------------------------------------------------------------------
  function QC_OnMenuCallback(gcbo, eventdata)
    
    PARA = tsg.preference.parameter;
 
    % Make the QC code uipanel visible
    % --------------------------------
    set( hbgQc,                'Visible' ,'on');
    set( hbgParameter,         'Visible', 'off');
    
    % Desactivate toggletools.
    % ------------------------
    set( hZoomToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    set( hCalToggletool,        'state', 'off', 'enable', 'off'  );
    set( hInterpToggletool,     'state', 'off', 'enable', 'off' );
 
    % Activate right clic context menu on first axes (salinity)
    % ---------------------------------------------------------
    set(hPlotAxes(1),'UIContextMenu', hQcCmenu);

    % Activate clic mouse menu on first axes (salinity) for next rbbox
    % ----------------------------------------------------------------
    set(hPlotAxes(1),'ButtonDownFcn', @QC_SelectCallback);
   
    % change cursor to crosshair aspect
    % ---------------------------------
    set( hMainFig, 'Pointer', 'crosshair');
    
    % -------------------------------------------------------------
    % nested function on mouse clic when QC toggle tool is selected
    % -------------------------------------------------------------
    function QC_SelectCallback(gcbo, eventdata)
      
      % disable ButtonMotion on main fig during select
      % prevent drawing to map
      % ----------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', []);

      % Retrieve named application data
      % -------------------------------
      tsg = getappdata( hMainFig, 'tsg_data');

      % Selection of the data within the figure
      % ---------------------------------------
      point1    = get(gca,'CurrentPoint');    % button down detected
      finalRect = rbbox;                      % return figure units
      point2    = get(gca,'CurrentPoint');    % button up detected

      point1 = point1(1,1:2);                 % extract x and y
      point2 = point2(1,1:2);

      p1 = min(point1,point2);
      p2 = max(point1,point2);                % calculate locations

      % The following code is only executed if the left mouse button is clicked.
      % If the right mouse button is clicked, this code must not be
      % executed as the variable 'ind' will be emptied. And this variable
      % is used when the context menu (callback 'Qc') is called
      % -----------------------------------------------------------------
      if ~strcmp( get(gcf, 'SelectionType'), 'alt')

        % The QC is applied either on TSG data either on Sample data.
        % it depends if the Botte Toggle button has been cliked on
        % -----------------------------------------------------------
        if strcmp( get(hBottleToggletool, 'state'), 'on')

          % get index on selected zone
          % --------------------------
          ind = find(tsg.DAYD_SPL            > p1(1,1) &...
                     tsg.DAYD_SPL            < p2(1,1) & ...
                     tsg.([PARA '_SPL_DIF']) > p1(1,2) &...
                     tsg.([PARA '_SPL_DIF']) < p2(1,2));

          % Keep the information on the indices of the selected zone
          % --------------------------------------------------------
          tsg.rbboxind = ind .* ones(size(ind));
          
          % Modifiy the QC
          % --------------
          tsg.([PARA '_SPL_QC'])(ind) = tsg.qc.active.Code;

          % Save the modifications
          % ----------------------
          setappdata( hMainFig, 'tsg_data', tsg);
          
          % Update sample QC in the _WS and _EXT records
          % --------------------------------------------
          updateSampleQC( hMainFig, PARA );

          % plot selected data with selected code
          % --------------------------------------
          plot_Correction( hMainFig, hPlotAxes, PARA);

        else

          % get index on selected zone
          % ---------------------------
          ind = find(tsg.DAYD   > p1(1,1) & tsg.DAYD   < p2(1,1) & ...
                     tsg.(PARA) > p1(1,2) & tsg.(PARA) < p2(1,2));

          % Keep the information on the indices of the selected zone
          % --------------------------------------------------------
          tsg.rbboxind = ind .* ones(size(ind));
          
          % Modifiy the QC
          % --------------
          tsg.([PARA '_QC'])(ind) = tsg.qc.active.Code;

          % put last SSPS_QC in queue (Undo/Redo)
          % -------------------------------------
          tsg.queue = push( tsg.queue, tsg.([PARA '_QC']));

          % store QC in queue object, for undo
          % ----------------------------------
          tsg.queue = push(tsg.queue, tsg.([PARA '_QC']));

          % Save the modifications
          % ----------------------
          setappdata( hMainFig, 'tsg_data', tsg);

          % Draw plot 1 of the validation figure 
          % ------------------------------------
          plot_Validation( hMainFig, hPlotAxes, 1, PARA );

          % refresh QC statistic panel
          % --------------------------
          display_QC( hMainFig, hPlotAxes );

          % enable undo menu
          % ----------------
          set(findobj('tag','UIMENU_UNDO'),'enable','on');
        end

        % As soon as a modification took place the data should be saved
        % -------------------------------------------------------------
        set( hSaveMenu, 'UserData', 'on' );

      end

      % enable ButtonMotion on main fig after select QC area
      % ----------------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', @MouseMotion);

    end
  end

%% QC_OffMenuCallback .............................. Quality Control Module
  %----------------------------------------------------------------------
  % Callback function run when the QC toggle tool is released
  %----------------------------------------------------------------------
  function QC_OffMenuCallback(gcbo, eventdata)

    % Desactive right clic menu on first axes (salinity)
    % ---------------------------------------------------
    set(hPlotAxes(1),'UIContextMenu', []);
    
    % Desactive clic mouse menu (zoom) on first axes (salinity)
    % ----------------------------------------------------------
    set(hPlotAxes(1),'ButtonDownFcn', []);
    
    % Uipanel visible or not
    % -----------------------
    set( hbgQc,        'Visible', 'off' );
    
    set( hTimelimitToggletool,  'state', 'off' );
    
    if strcmp( get(hBottleToggletool, 'state'), 'off' )
      set( hCalToggletool,        'state', 'off', 'enable', 'on' );
      set( hInterpToggletool,     'state', 'off', 'enable', 'on' );
    end

    % uibuttongroup uipanel used to choose a parameter is set to
    % on only if the Correction screen (bottle toggletool) is off
    % -----------------------------------------------------------
    if  strcmp( get( hBottleToggletool, 'state'), 'off')
      set( hbgParameter, 'Visible', 'on');
    end
    % cursor back to normal
    % ---------------------
    set(hMainFig,'Pointer','arrow');
    
  end

%% Qc context menu selected ........................ Quality Control Module
  %-----------------------------------------------------------
  % Callback function run when the QC context menu is selected
  %
  % Context menu used to attribute a QC to the TSG time series
  %
  %-----------------------------------------------------------
  function Qc(hObject, eventdata, key)

    % Retrieve Default Quality Code and Color
    % ---------------------------------------
    tsg    = getappdata( hMainFig, 'tsg_data');
    
    % Get the parameter (SSPS, SSJT or SSTP)
    % --------------------------------------
    PARA = tsg.preference.parameter;

    % get key and some values in hashtable
    % ------------------------------------
    code  = get(tsg.qc.hash, key, 'code');
    color = get(tsg.qc.hash, key, 'color');

    % set active code and color from selected context menu
    % ----------------------------------------------------
    tsg.qc.active.Code  = code;
    tsg.qc.active.Color = color;
    
    % Modify and plot the last selected tsg data
    % ------------------------------------------
    if ~isempty( tsg.rbboxind )

      if strcmp( get(hBottleToggletool, 'state'), 'on')

        tsg.([PARA '_SPL_QC'])(tsg.rbboxind) = tsg.qc.active.Code;

        % Save tsg.SSPS_QC and tsg.qc.active.Code 
        % in the application data
        % ----------------------------------------
        setappdata( hMainFig, 'tsg_data', tsg );

        % Draw the 3 plots of the Correction figure
        % -----------------------------------------
        plot_Correction( hMainFig, hPlotAxes, PARA );

      else
        tsg.([PARA '_QC'])(tsg.rbboxind) = tsg.qc.active.Code;

        % Save tsg.SSPS_QC in the application data
        % ----------------------------------------
        setappdata( hMainFig, 'tsg_data', tsg );
     
        % Draw plot 1 of the validation figure
        % ------------------------------------
        plot_Validation( hMainFig, hPlotAxes, 1, PARA );
        
      end

    end

    % Update the radio button corresponding to the selected
    % QC context menu (rbg : RadioButtonGroup)
    % -----------------------------------------------------
    radioTag     = ['TAG_QC_RADIO_' key];        % Build the TAG of the CODE
    hbgChildren  = get(hbgQc,'Children');        % Get the handles of the rbg
    hbgTagCell   = get(hbgChildren, 'tag');      % get the TAG of the rbg
    ind          = strcmp(radioTag, hbgTagCell); % Compare the TAG
    hRadioButton = hbgChildren( ind == 1 );      % Get the handle of the button
    set(hbgQc, 'SelectedObject', hRadioButton);  % Make this button active

    setappdata( hMainFig, 'tsg_data', tsg );

  end

%% Radiobutton Quality Control ..................... Quality Control Module
  % ---------------------------------------------------------------
  % Callback to select CODE and COLOR QC from the RadioButton Group
  % ---------------------------------------------------------------
  function RadiobuttonQc(source, eventdata)
        
      % Retrieve Default Quality Code and Color
      % ---------------------------------------
      tsg = getappdata( hMainFig, 'tsg_data');
     
      % Retrieve the key from the active RadioButton
      % --------------------------------------------
      rbTag = get(eventdata.NewValue,'Tag');
      key = strrep(rbTag, 'TAG_QC_RADIO_', '');

      % store his handle to uibuttongroup userdata
      % ------------------------------------------
      set(hbgQc,'Userdata', eventdata.NewValue);
      
      % get key and some values in hashtable
      % ------------------------------------
      code  = get(tsg.qc.hash, key, 'code');
      color = get(tsg.qc.hash, key, 'color');
       
      % set active code and color from selected context menu
      % ----------------------------------------------------
      tsg.qc.active.Code  = code;
      tsg.qc.active.Color = color;

      setappdata( hMainFig, 'tsg_data', tsg );

  end

%% Radiobutton Parameter choice ..................... Parameter choice
  % ---------------------------------------------------------------
  % Callback to select CODE and COLOR QC from the RadioButton Group
  % ---------------------------------------------------------------
  function RadiobuttonParameter(source, eventdata)

    % If the map is visible, hide it
    % ------------------------------
    set( hMapPanel,       'visible', 'off' );
    set( hMapToggletool,  'state',   'off');
    set( hClimToggletool, 'state',   'off'); 
    
    % Retrieve Default Quality Code and Color
    % ---------------------------------------
    tsg = getappdata( hMainFig, 'tsg_data');

    % Retrieve the key from the active RadioButton
    % --------------------------------------------
    rbTag_Old = get(eventdata.OldValue,'Tag');
    rbTag     = get(eventdata.NewValue,'Tag');
    PARA = strrep(rbTag, 'TAG_PARA_RADIO_', '');

    % Test if PARA exists
    % -------------------
    ind = find( isnan(tsg.(PARA)) == 0 );
    if ~isempty( tsg.(PARA) ) & ~isempty (ind )

      % store his handle to uibuttongroup userdata
      % ------------------------------------------
      set(hbgParameter,'Userdata', eventdata.NewValue);

      tsg.preference.parameter = PARA;

      setappdata( hMainFig, 'tsg_data', tsg );

      % Get sample data
      % ---------------
      tsg_mergesample( hMainFig, PARA );

      % The smooth TSG time series (tsg_moveaverage) is
      % no more computed : too long
      % We now computed a smooth value only at the position of the sample
      % in diffTsgSample
      % -----------------------------------------------------------------
      %tsg_moveaverage(hMainFig, PARA);

      % Draw the 3 plots of the validation figure
      % -----------------------------------------
      resetAxes( hMainFig, hPlotAxes )

      plot_Validation( hMainFig, hPlotAxes, 1, PARA );
      plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
      plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );

    else
      msgbox( ['No ' PARA ' data in the file'], 'Parameter choice', 'warn', 'modal');

      % Set the old radio-button active
      % -------------------------------
      hbgChildren  = get(hbgParameter,'Children');        % Get the handles of the rbg
      hbgTagCell   = get(hbgChildren, 'tag');             % get the TAG of the rbg
      ind          = strcmp(rbTag_Old, hbgTagCell);       % Compare the TAG
      hRadioButton = hbgChildren( ind == 1 );             % Get the handle of the button
      set(hbgParameter, 'SelectedObject', hRadioButton);  % Make this button active

    end

  end

%% preQcPanCallback .................................Quality Control Module
  % ---------------------------------------------------------------
  % Callback function ... to be completed
  % ---------------------------------------------------------------
  function preQcPanCallback(obj, evd)

    set(hQCToggletool, 'state', 'off' );

  end

%% postQcPanCallback ............................... Quality Control Module
  % ---------------------------------------------------------------
  % Callback function ... to be completed
  % ---------------------------------------------------------------
  function postQcPanCallback(obj, evd)

    set(hQCToggletool, 'state', 'on' );

    % Set the right limit and interval to the 3 axes
    % ----------------------------------------------
    for iaxe = 1:3
      set(hPlotAxes(iaxe),'XTickMode','auto')
      datetick(hPlotAxes(iaxe),'x','keeplimits')
    end

  end

%% MouseMotion
  %---------------------------------------------------------------------
  % Callback function run when mouse pointer is moving on temperature plot
  % draw corresponding measurement position on map
  %---------------------------------------------------------------------
  function MouseMotion(hObject, eventdata)

    % Test if the callback can be activated
    % -------------------------------------
    if strcmp( get( hMainFig, 'UserData'), 'ButtonMotionOn')

      % Retrieve named application data
      % -------------------------------
      tsg = getappdata( hMainFig, 'tsg_data');

      % Get current position of cusor and return its coordinates in
      % axes with handle h_axes
      % -----------------------------------------------------------
      a = get(hPlotAxes(1), 'CurrentPoint');
      x = a(2,1);
      y = a(2,2);
      
      % Get the Limits of axes 1
      % ------------------------
      limx = get(hPlotAxes(1), 'XLim');
      limy = get(hPlotAxes(1), 'YLim');

      % Code to Activate the PAN function when QC mode is active
      % A PAN zone is defined in the bottom (10%) of PlotAxes(1)
      % 2 callback are needed : 
      %    1 - one to desactivate QC when Pan is set to on.
      %    2 - one to reactivate QC once the pan has been used.
      % ---------------------------------------------------------
      qcState = get(hQCToggletool,   'state' );
      if strcmp(qcState, 'on' );
        
        % Suppose that Y axes is increasing from the bottom to the top
        % ------------------------------------------------------------
        limy2 = limy(1) + (limy(2)-limy(1)) * 0.10;

        if  x > limx(1) && x < limx(2) &&  y <= limy2 && y >= limy(1)
          hPan = pan(hMainFig);
          set(hPan,'ActionPreCallback',  @preQcPanCallback);
          set(hPan,'ActionPostCallback', @postQcPanCallback);
          set(hPan,'Enable','on');
        else
          pan off
        end
      end
      
      % Dynamically display data in uicontrol
      % -------------------------------------
      if x > tsg.DAYD(1) && x < tsg.DAYD(end)
      %if  x > limx(1) && x < limx(2)

        indCursor = find( tsg.DAYD > x);
        set( hInfoDateText, 'String',...
          datestr(tsg.DAYD(indCursor(1)),'dd/mm/yyyy   HH:MM'));
        set( hInfoLatText,  'String', dd2dm(tsg.LATX(indCursor(1)),0));
        set( hInfoLongText, 'String', dd2dm(tsg.LONX(indCursor(1)),1));
        set( hInfoSSPSText, 'String', tsg.SSPS(indCursor(1)));
        set( hInfoSSJTText, 'String', tsg.SSJT(indCursor(1)));
        if ~isempty(tsg.SSTP)
          set( hInfoSSTPText, 'String', tsg.SSTP(indCursor(1)));
        end

        % Plot the position on the map if this one is active
        % --------------------------------------------------
        if strcmp( get(hMapPanel, 'Visible'), 'on')

          % Select the map axes
          % -------------------
          axes( hPlotAxes(4));

          if isempty( get(hMapPanel, 'UserData'))
            if ~isnan( tsg.LONX(indCursor(1)) )
              hMarker = m_line( tsg.LONX(indCursor(1)), tsg.LATX(indCursor(1)),...
                'Marker','o','MarkerSize',5, ...
                'Color','r', 'MarkerFaceColor','r');
              set(hMapPanel, 'UserData', hMarker);
            end
          else
            if ~isnan( tsg.LONX(indCursor(1)) )

              delete(get(hMapPanel, 'UserData'));
              hMarker = m_line( ...
                tsg.LONX(indCursor(1)), tsg.LATX(indCursor(1)),...
                'Marker','o','MarkerSize',5, ...
                'Color','r', 'MarkerFaceColor','r');
              set(hMapPanel, 'UserData', hMarker);
            end
          end
          
        end
      end
    end
  end

%% Map_OffMenuCallback
  %---------------------------------------------------------------------
  % Callback function run when the Map tool bar item is unselected
  %---------------------------------------------------------------------
  function Map_OffMenuCallback(hObject, eventdata)
    
   % Make the earth map invisible
    % ----------------------------
    set(hMapPanel, 'Visible', 'off' ); 

  end

%% Map_OnMenuCallback
  %---------------------------------------------------------------------
  % Callback function run when the Map tool bar item is selected
  %---------------------------------------------------------------------
  function Map_OnMenuCallback(hObject, eventdata)
     
    % Desactivate Zoom and Pan toggle buttons
    % may be change in the futur ...
    % ---------------------------------------
    set(hZoomToggletool,  'state', 'off' );
    set(hPanToggletool,  'state', 'off' );

    % Make the earth map visible
    % --------------------------
    set(hMapPanel, 'Visible', 'on' );
    
    erase_Line( hPlotAxes, 4 );

    plot_map( hMainFig, hPlotAxes)
    
  end

%% Bottle_OnMenuCallback ................................ Correction Module
  %---------------------------------------------------------------------
  % Callback function run when the bootle push tool is selected
  %---------------------------------------------------------------------
  function Bottle_OnMenuCallback(hObject, eventdata)
    % Callback function run when the Bottle tool bar item is selected

    % Get the tsg structure
    % ---------------------
    tsg = getappdata(hMainFig, 'tsg_data');
    
    % Get the parameter we are working on (SSPS, SSJT, SSTP)
    % ------------------------------------------------------
    PARA = tsg.preference.parameter;
    
    % Switch somme buttons
    % --------------------
    set( hZoomToggletool,       'state',  'off' );
    set( hQCToggletool,         'state',  'off' );
    set( hPanToggletool,        'state',  'off' );
    set( hMapToggletool,        'state',  'off' ); 
    set( hClimToggletool,       'state', 'off', 'enable', 'off');
    set( hCalToggletool,        'enable', 'off' );
    set( hInterpToggletool,     'enable', 'off' );
    set( hTimelimitToggletool,  'enable', 'on' );

    % Activate ord desactivate uipanels
    % ---------------------------------
    set( hpDateLimit,           'Visible', 'on' );
    set( hbgCorMethod,          'Visible', 'on' );
    set( hCorPanel,             'Visible', 'on' );
    set( hbgParameter,          'Visible', 'off');
    set( hbgQc,                 'Visible', 'off');

    % Test if tsg and sample data have been loaded
    % --------------------------------------------
    if ~isempty( tsg.([PARA '_SPL']) )
        
%       % Running average of TSG time series
%       % ----------------------------------
%       tsg_moveaverage(hMainFig, PARA);
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      
      % Plot in the 3 axes
      % ------------------
      plot_Correction( hMainFig, hPlotAxes, PARA );

      % Get the information on time limits of the time series
      % Write them in the uipanel
      % -----------------------------------------------------
      noNaN = tsg.DAYD(~isnan( tsg.DAYD ));
      set( hetDateMin, 'String', datestr(noNaN(1), 31));
      set( hetDateMax, 'String', datestr(noNaN(end), 31)); 

    else

      % Desactivate the corretion module
      % --------------------------------
      set( hBottleToggletool, 'state', 'off' );
      
      msgbox('Sample data not loaded in the program', 'modal');

    end
  end

%% Bottle_OffMenuCallback ............................... Correction module
  %---------------------------------------------------------------------
  % Callback function run when the bootle push tool is selected
  %---------------------------------------------------------------------
  function Bottle_OffMenuCallback(hObject, eventdata)
    
    % If necessary toggle off some buttons
    % ------------------------------------
    set( hZoomToggletool,      'state',  'off' );
    set( hQCToggletool,        'state',  'off' );
    set( hPanToggletool,       'state',  'off' );
    set( hMapToggletool,       'state',  'off' ); 
    set( hClimToggletool,      'enable', 'on');
    set( hCalToggletool,       'enable', 'on'  );
    set( hInterpToggletool,    'enable', 'on' );
    set( hTimelimitToggletool, 'enable', 'off' );
    
    % Activate or Desactivate uipanel
    % --------------------------------
    set( hpDateLimit,          'Visible', 'off' );
    set( hCorPanel,            'Visible', 'off' );
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    set( hbgCorMethod,         'Visible', 'off' );
    set( hbgParameter,         'Visible', 'on');

    % Desactivate Click Mouse on figure
    % ---------------------------------
    set( hMainFig, 'WindowButtonDownFcn', []);
    
    % Get tsg structure
    % -----------------
    tsg  = getappdata( hMainFig, 'tsg_data' );
    
    % Get the parameter (SSPS, SSJT, SSTP)
    % ------------------------------------
    PARA = tsg.preference.parameter;
     
    % Drawing only necessary if the Correction moduel has been activated
    % ------------------------------------------------------------------
    if ~isempty( tsg.([PARA '_SPL']) )

      % Draw the 3 plots of the validation figure
      % -----------------------------------------
      plot_Validation( hMainFig, hPlotAxes, 1,  PARA );
      plot_Validation( hMainFig, hPlotAxes, 2, 'SSJT' );
      plot_Validation( hMainFig, hPlotAxes, 3, 'SPDC' );
    end
    
    % Set the pointer
    % ---------------
    set( hMainFig, 'Pointer', 'arrow');

  end

%% CorCancelCallback .................................... Correction Module
  function CorCancelCallback(hObject, eventdata)
    % Callback function run when ...
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );

    % Get tsg application data
    % ------------------------
    tsg = getappdata(hMainFig, 'tsg_data');

    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % --------------------------------------------------
    PARA = tsg.preference.parameter;

    % To cancel the correction set the ERROR to [] then
    % call updateAdjustedVariable.
    % --------------------------------------------------
    tsg.([PARA '_ADJUSTED_ERROR']) = [];

    % Save tsg data
    % -------------
    setappdata(hMainFig, 'tsg_data', tsg);

    % Set the ADJUSTED variable either to the raw variable or to
    % the calibrated variable
    % ----------------------------------------------------------
    updateAdjustedVariable( hMainFig );

    % Plot in the 3 axes
    % ------------------
    plot_Correction( hMainFig, hPlotAxes, PARA );

  end

%% CorLinearCallback .................................... Correction Module
  function CorLinearCallback(hObject, eventdata)
    % Callback function run when

    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );

    % Get the time limits for the correction A TESTER
    % -----------------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get the parameter (SSPS, SSJT, or SSTP)
    % ---------------------------------------
    tsg  = getappdata(hMainFig, 'tsg_data');
    PARA = tsg.preference.parameter;

    % Compute the sample-TSG differences
    % ----------------------------------
    diffTsgSample( hMainFig, PARA );

    % Correction
    % ----------
    error = corTsgLinear(hMainFig, PARA, dateMin, dateMax);

    switch error

      case 1

        % Plot in the 3 axes
        % ------------------
        plot_Correction( hMainFig, hPlotAxes, PARA );

      case -1
        msgbox( 'Date limits are not correct',...
          'Correction module', 'warn', 'modal');
    end

  end

%% CorMedianCallback .................................... Correction Module
  function CorMedianCallback(hObject, eventdata)
    % Callback function run when

    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );

    % Get the time limits for the correction A TESTER
    % --------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get the parameter (SSPS, SSJT, or SSTP)
    % ---------------------------------------
    tsg  = getappdata(hMainFig, 'tsg_data');
    PARA = tsg.preference.parameter;

    % Compute the sample-TSG differences
    % ----------------------------------
    diffTsgSample( hMainFig, PARA );

    % Correction
    % ----------
    error = corTsgMedian(hMainFig, PARA, dateMin, dateMax);

    switch error

      case 1

        % Plot in the 3 axes
        % ------------------
        plot_Correction( hMainFig, hPlotAxes, PARA );

      case -1
        msgbox( 'Date limits are not correct',...
                'Correction module', 'warn', 'modal');
    end

  end

%% SelectTime_OnMenuCallback
%---------------------------
  function SelectTime_OnMenuCallback(hObject, eventdata)
    % Callback function run when the ....
            
    % Desactivate Zoom and Pan functions.
    % ----------------------------------
    set( hZoomToggletool, 'state', 'off' );
    set( hQCToggletool,   'state', 'off' );
    set( hPanToggletool,  'state', 'off' );
    
    % Create a pointer to select the time limits
    % ------------------------------------------
    selTimePointer = ones(16)+1;
    selTimePointer(1,:)       = 1; selTimePointer(16,:)      = 1;
    selTimePointer(:,1)       = 1; selTimePointer(:,16)      = 1;
    selTimePointer(1:4,8:9)   = 1; selTimePointer(13:16,8:9) = 1;
    selTimePointer(8:9,1:4)   = 1; selTimePointer(8:9,13:16) = 1;
    selTimePointer(5:12,5:12) = NaN; % Create a transparent region in the center
    
    % Activate clic mouse menu on second axes (salinity) for next rbbox
    % ----------------------------------------------------------------
    set(hMainFig,'WindowButtonDownFcn', @Time_SelectCallback);

    % change cursor
    % ---------------
    set( hMainFig, 'Pointer', 'custom',...
      'PointerShapeCData', selTimePointer, 'PointerShapeHotSpot',[9 9]);

    % ----------------------------------------------------------------------
    % nested function on mouse clic when Select Time toggle tool is selected
    % ----------------------------------------------------------------------
    function Time_SelectCallback(gcbo, eventdata)

      % disable ButtonMotion on main fig during select
      % prevent drawing to map
      % ----------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', []);

      % Retrieve named application data
      % -------------------------------
      tsg = getappdata( hMainFig, 'tsg_data');

      % Selection of the data within the figure
      % ---------------------------------------
      point1    = get(gca,'CurrentPoint');    % button down detected
      finalRect = rbbox;                      % return figure units
      point2    = get(gca,'CurrentPoint');    % button up detected

      point1 = point1(1,1:2);                 % extract x and y
      point2 = point2(1,1:2);

      p1 = min(point1,point2);
      p2 = max(point1,point2);                % calculate locations

      % get index on selected zone - Only on X axes (time)
      % --------------------------------------------------
      ind = find(tsg.DAYD >= p1(1,1) & tsg.DAYD <= p2(1,1));

      % Write the date in the Editable uicontrol
      % ----------------------------------------
      set( hetDateMin, 'String', datestr(tsg.DAYD(ind(1)),   31));
      set( hetDateMax, 'String', datestr(tsg.DAYD(ind(end)), 31));

      % enable ButtonMotion on main fig after select QC area
      % ----------------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', @MouseMotion);
    end
  end

%% SelectTime_OffMenuCallback
%----------------------------
  function SelectTime_OffMenuCallback(hObject, eventdata)
  % Callback function run when the ....
  
  % Desactivate time limit buttons
  % ------------------------------
  set( hTimelimitToggletool, 'state', 'off');

  set( hMainFig, 'WindowButtonDownFcn', []);

  set( hMainFig, 'Pointer', 'arrow');

  end

%% Clim_OffMenuCallback
  %------------------------------------------------------------------------
  % Callback function run when the Levitus climatology toolbar is unselected
  %------------------------------------------------------------------------
  function Clim_OffMenuCallback(hObject, eventdata)

    % Get lines handles from tag
    % --------------------------
    hLines = findobj('-regexp', 'Tag', 'TAG_LINE_CLIMATO_');
    
    % Delete climatology lines on axes
    % ---------------------------------
    delete(hLines);
    
  end

%% Clim_OnMenuCallback
  %------------------------------------------------------------------------
  % Callback function run when the Levitus climatology toolbar is unselected
  %------------------------------------------------------------------------
  function Clim_OnMenuCallback(hObject, eventdata)

    % Test if the TSG and bucket files have been read
    % -----------------------------------------------
    if strcmp( get(hOpenMenu, 'UserData'), 'on' )

      % plot climatology
      % ----------------
      plot_Climatology(hMainFig, hPlotAxes);
      
    end
  end

%% ClimatoSelectMenuCallback
  % -------------------------------------------------------------------
  % Callback function run when climato submenu is selected
  % -------------------------------------------------------------------
  function ClimatoSelectMenuCallback(hObject, eventdata, climato, time)
    
    % find all climato submenu and set 'checked' property to 'off'
    % ------------------------------------------------------------
    hdl = findobj( '-regexp', 'tag', 'TAG_UIMENU_CLIMATO');
    set(hdl, 'checked', 'off');
    
    % set current climato submenu checked
    % -----------------------------------
    set(hObject, 'checked', 'on');
    
    % memorize action on climatology menu for next use
    % ------------------------------------------------
    s.type = climato;
    s.time = time;
    set(hClimatoMenu, 'userdata', s);
    
    % check if climatology toggle button is set
    % -----------------------------------------
    if strcmp(get(hClimToggletool, 'state'), 'on')
      
      % clear last plotted climatology
      % ------------------------------
      Clim_OffMenuCallback;
      
      % plot and read (eventually) new climatology
      % ------------------------------------------
      plot_Climatology(hMainFig, hPlotAxes);
    end
    
  end

%% PreferencesMenuCallback
  % -------------------------------------------------------------------
  % Callback function run when Option/Preference is selected
  % -------------------------------------------------------------------
  function PreferencesMenuCallback(hObject, eventdata)
    
    % Test if the preference menu is allready checked
    % -----------------------------------------------
    if strcmp( get(hObject, 'checked'), 'on' )
      
      % set preference autoload off (unchecked)
      % ---------------------------------------
      tsg.preference.autoload = 'off';
      
    else
      
      % set preference autoload on (checked)
      % ------------------------------------
      tsg.preference.autoload = 'on';
      
    end

     % set current option/preference submenu state
     % -------------------------------------------
     set(hObject, 'checked', tsg.preference.autoload);
    
  end


%% HeaderMenuCallback
% -------------------------------------------------------------------
% Callback function run when the headerForm tool bar item is selected
% -------------------------------------------------------------------
  function HeaderMenuCallback(hObject, eventdata)

    % call header form function
    % -------------------------
    headerForm(hMainFig);

  end

%% PrintFigMenuCallback
% -------------------------------------------------------------------
% Callback function run when the Report tool bar item is selected
% -------------------------------------------------------------------
  function PrintFigMenuCallback(hObject, eventdata)
      
      % disable ButtonMotion on main fig during select
      % prevent drawing to map
      % ----------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', []);
      
      msgbox( 'Function not yet implemented', 'warn', 'modal');

% printpreview(hMainFig);
   
%printdlg;
%dlg = pagesetupdlg(hMainFig);

%waitfor(dlg)
      % enable ButtonMotion on main fig after select QC area
      % ----------------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', @MouseMotion);

  end


%% ReportMenuCallback
% -------------------------------------------------------------------
% Callback function run when the Report tool bar item is selected
% -------------------------------------------------------------------
  function ReportMenuCallback(hObject, eventdata)

    % call report function
    % --------------------
    saveReport(hMainFig);

  end

%% SaveMenuCallback
% -------------------------------------------------------------------
% Callback function run when the Save menu item is selected
% -------------------------------------------------------------------
  function SaveMenuCallback(hObject, eventdata)

    % Retrieve named application data
    % -------------------------------
    tsg = getappdata( hMainFig, 'tsg_data');

    % fill or append header form
    % -------------------------
    error = headerForm(hMainFig);

    % if user press continue button, ask for netcdf file
    % ------------------------------------------------
    if error ~= -1
      [fileName, pathName, filterindex] = uiputfile('*.nc', ...
        'Save file name', strcat(tsg.file.name, '.nc'));

      % if user press cancel button, all var are set to zero
      % ----------------------------------------------------
      if filterindex == 0
        return;
      end

      % Pointer set to watch during reading and plotting
      % ------------------------------------------------
      set( hMainFig, 'Pointer', 'watch' );

      % flushes the event queue and updates the closed uiputfile window
      % ---------------------------------------------------------------
      drawnow;

      % write netcdf file
      % -----------------
      error = writeTSGDataNetCDF(hMainFig, strcat(pathName, fileName));

      % Pointer reset to arrow
      % ----------------------
      set( hMainFig, 'Pointer', 'arrow' );

      % Check for NetCDF writing error 
      % must to be rewriting
      % ------------------------------
      if error == -1
        warning('tsgqc:SaveMenuCallback', ...
                'NetCDF writing error: %s %s', pathName, fileName);
        return;
      end

      % update the display
      % ------------------
      set( hInfoFileText, 'String', strcat(tsg.file.name, tsg.file.ext));
      
      % Write a TXT file
      % ----------------
      fileName = strcat(tsg.file.name, '_w.txt');
      error    = writeTsgDataTxt(hMainFig, strcat(pathName, fileName));

      % Check for TxT writing error - must to be rewriting
      % --------------------------------------------------
      if error == -1
        warning('tsgqc:SaveMenuCallback', ...
                'TxT writing error: %s %s', pathName, fileName);
        return;
      end

      % enable Quality Control mode
      % ---------------------------
      hdl_pushtool = findobj('Tag', 'QC');
      set(hdl_pushtool, 'Enable', 'on');
    end

  end

%% ExportMenuCallback
% -------------------------------------------------------------------
% Callback function run when the Export menu item is selected
% -------------------------------------------------------------------
  function ExportMenuCallback(hObject, eventdata)

    % Retrieve named application data
    % -------------------------------
    tsg = getappdata( hMainFig, 'tsg_data');

    %
    % ------------------------------------------------
    [fileName, pathName, filterindex] = uiputfile('*.tsg', ...
      'Save file name', strcat(tsg.file.name, '.tsg'));

    % if user press cancel button, all var are set to zero
    % ----------------------------------------------------
    if filterindex == 0
      return;
    end

    % Pointer set to watch during reading and plotting
    % ------------------------------------------------
    set( hMainFig, 'Pointer', 'watch' );

    % update the display
    % ------------------
    set( hInfoFileText, 'String', strcat(tsg.file.name, tsg.file.ext));

    % Write a .TSG (ascii)  file
    % --------------------------
    error = writeTsgDataTsg(hMainFig, strcat(pathName, fileName));

    % Check for .TSG writing error - must to be rewriting
    % --------------------------------------------------
    if error == -1
      warning('tsgqc:SaveMenuCallback', ...
        'TSG writing error: %s %s', pathName, fileName);
      return;
    end

    % Pointer reset to arrow
    % ----------------------
    set( hMainFig, 'Pointer', 'arrow' );

    % enable Quality Control mode
    % ---------------------------
    hdl_pushtool = findobj('Tag', 'QC');
    set(hdl_pushtool, 'Enable', 'on');

  end

%% UndoMenuCallback
  % -----------------------------------------------------------------------
  % Callback function run when the Edit/Undo menu item is selected (Ctrl+Z)
  % -----------------------------------------------------------------------
  function UndoMenuCallback(hObject, eventdata)  
 
    % Undo module not yet implemented
    % -------------------------------
    % msgbox('Undo module not yet implemented', 'modal');
    
    tsg.queue = undo(tsg.queue);
    tsg.SSPS_QC = get(tsg.queue);
   
    % Make the Salinity, temperature and velocity plot
    % ------------------------------------------------
    plot_SalTempVel( hMainFig, hPlotAxes );

  end

%% RedoMenuCallback
  % -----------------------------------------------------------------------
  % Callback function run when the Edit/Redo menu item is selected (Ctrl+R)
  % -----------------------------------------------------------------------
  function RedoMenuCallback(hObject, eventdata)  
 
    % Redo module not yet implemented
    % -------------------------------
    msgbox('Redo module not yet implemented', 'modal');
    
  end

%% QuitMenuCallback
  % -----------------------------------------------------------------
  % Callback function run when the Quit menu item is selected
  % -----------------------------------------------------------------
  function QuitMenuCallback(hObject, eventdata)  

    % save config mat file in prefdir
    % -------------------------------
    config_file = [prefdir, filesep, tsgqcname, '.mat'];

    % set tsg.levitus empty before save preferences in mat file
    % ---------------------------------------------------------
    tsg.levitus = [];

    % save preference mat file
    % ------------------------
    save( config_file, 'tsg');

    % If the data have been modified and not save, the program
    % ask to save the data
    % --------------------------------------------------------
    if  strcmp( get( hSaveMenu, 'UserData' ), 'on')
      selection = ...
        questdlg('The file has been modified.  Do you want to save it ?',...
        'Save before Quit?',...
        'Yes', 'No', 'Yes');
      
      if strcmp(selection, 'Yes')
        
        % call File/Save Menu Callback before before quit
        % -----------------------------------------------
        SaveMenuCallback;
             
      end
      
      % quit program
      % ------------
      quitProgram(hMainFig, DEFAULT_PATH_FILE);
      
    else
      selection = ...
        questdlg(['Quit ' get(hMainFig, 'Name') '?'],...
        ['Quit ' get(hMainFig, 'Name') '?'],...
        'Yes', 'No', 'Yes');
      if strcmp(selection, 'No')
        return;
      else
        quitProgram(hMainFig, DEFAULT_PATH_FILE);
      end
    end

  end

% ----------------
end