tsgqc.m

      
    end % end of BuntonMotionOn
    
  end % end of mouseMotion function

%% Map_OnMenuCallback
%---------------------------------------------------------------------
% Callback function run when the Map tool bar item is selected
%---------------------------------------------------------------------
  function Map_OnMenuCallback(src, evnt)
    
    % Desactivate Zoom and Pan toggle buttons
    % ---------------------------------------
    set(hZoomInToggletool,  'state', 'off' );
    set(hZoomOutToggletool,  'state', 'off' );
    set(hPanToggletool,   'state', 'off' );
    
    % Make the earth map visible
    % --------------------------
    set(hMapFig, 'Visible', 'on' );
    
    erase_Line( hPlotAxes, 4 );
    
    plot_map( hMainFig, hPlotAxes)
    
    % De-activate keyPressFcn callback on main fig
    % --------------------------------------------
    %set(hMainFig, 'KeyPressFcn', []);
    
  end

%% Map_OffMenuCallback
%---------------------------------------------------------------------
% Callback function run when the Map tool bar item is unselected
%---------------------------------------------------------------------
  function Map_OffMenuCallback(src, evnt)
    
    % Make the earth map invisible
    % ----------------------------
    set(hMapFig, 'Visible', 'off' );
 
    % Re-activate keyPressFcn callback on main fig
    % see Enabling user callbacks during zoom/pan on Undocumented Matlab
    % https://undocumentedmatlab.com/blog/enabling-user-callbacks-during-zoom-pan
    % This should work in both HG1 and HG2:
    % ------------------------------------------------------------------------
    %     hManager = uigetmodemanager(hMainFig);
    %     try
    %       set(hManager.WindowListenerHandles, 'Enable', 'off'); % HG1 (prior R2014b)
    %     catch
    %       [hManager.WindowListenerHandles.Enabled] = deal(false);  % HG2 (R2014b)
    %     end
    %    set(hMainFig, 'WindowKeyPressFcn', []);
    
    % comment this line to prevent warning
    %    set(hMainFig, 'KeyPressFcn', @keyPressFcnCallback);
    
  end

%% Bottle_OnMenuCallback ................................ Correction Module
%---------------------------------------------------------------------
% Callback function run when the bootle push tool is selected
%---------------------------------------------------------------------
  function Bottle_OnMenuCallback(src, evnt)
    % Callback function run when the Bottle tool bar item is selected
    
    % Get the tsg structure
    % ---------------------
    tsg = getappdata(hMainFig, 'tsg_data');
    
    % Get the parameter we are working on (SSPS, SSJT, SSTP)
    % ------------------------------------------------------
    SAMPLE = tsg.plot.sample;
    PARA = getParaCorModule( hMainFig );
    
    % Switch somme buttons
    % --------------------
    set( hQCToggletool,         'state',  'off' );
    set( hZoomInToggletool,     'state', 'off', 'enable', 'on' );
    set( hZoomOutToggletool,    'state', 'off', 'enable', 'on' );
    set( hPanToggletool,        'state',  'off' );
    %     set( hMapToggletool,        'state',  'off' );
    set( hClimToggletool,       'state',  'off', 'enable', 'off');
    set( hCalToggletool,        'enable', 'off' );
    set( hInterpToggletool,     'enable', 'off' );
    set( hTimelimitToggletool,  'enable', 'on' );
    
    % Activate or desactivate uipanels
    % ---------------------------------
    set( hpDateLimit,           'Visible', 'on' );
    set( hbgCorMethod,          'Visible', 'on' );
    set( hCorPanel,             'Visible', 'on' );
    set( hbgParameter,          'Visible', 'off');
    set( hbgQc,                 'Visible', 'off');
    
    if ~isempty( tsg.([SAMPLE '_EXT']) )
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      tsg = getappdata( hMainFig, 'tsg_data');
      
    else
      
      msgbox('No sample data file has been read', 'modal');
      
    end
    
    % Plot in the 3 axes
    % ------------------
    plot_Correction( hMainFig, hPlotAxes, PARA );
    
    % Necessary to unzoom as the new plot keep in memory the preceding zoom
    % ---------------------------------------------------------------------
    zoom out;
    
    % reset map border
    % ----------------
    tsg.preference.map.border = ...
      str2double(tsg.preference.map.border_string(tsg.preference.map.border_value));
    setappdata( hMainFig, 'tsg_data', tsg );
    
    % Get the information on time limits of the time series
    % Write them in the uipanel
    % -----------------------------------------------------
    noNaN = tsg.DAYD(~isnan( tsg.DAYD ));
    set( hetDateMin, 'String', datestr(noNaN(1), 31));
    set( hetDateMax, 'String', datestr(noNaN(end), 31));
    
  end

%% Bottle_OffMenuCallback ............................... Correction module
%---------------------------------------------------------------------
% Callback function run when the bootle push tool is selected
%---------------------------------------------------------------------
  function Bottle_OffMenuCallback(src, evnt)
    
    % If necessary toggle off some buttons
    % ------------------------------------
    set( hQCToggletool,        'state',  'off' );
    set( hZoomInToggletool,    'state',  'off' );
    set( hZoomOutToggletool,   'state',  'off' );
    set( hPanToggletool,       'state',  'off' );
    %     set( hMapToggletool,       'state',  'off' );
    set( hClimToggletool,      'enable', 'on');
    set( hCalToggletool,       'enable', 'on'  );
    set( hInterpToggletool,    'enable', 'on' );
    set( hTimelimitToggletool, 'enable', 'off' );
    
    % Activate or Desactivate uipanel
    % --------------------------------
    set( hpDateLimit,          'Visible', 'off' );
    set( hCorPanel,            'Visible', 'off' );
    set( hbgCorMethod,         'Visible', 'off' );
    set( hbgParameter,         'Visible', 'on');
    
    % Desactivate Click Mouse on figure
    % ---------------------------------
    set( hMainFig, 'WindowButtonDownFcn', []);
    
    % Get tsg structure
    % -----------------
    tsg  = getappdata( hMainFig, 'tsg_data' );
    
    % Draw the 3 plots of the validation figure and unzoom as the new
    % plot keep in memory the preceding zoom
    % -----------------------------------------
    plot_Validation( hMainFig, hPlotAxes, 1, tsg.plot.parameter{1} );
    zoom out;
    plot_Validation( hMainFig, hPlotAxes, 2, tsg.plot.parameter{2} );
    zoom out;
    plot_Validation( hMainFig, hPlotAxes, 3, tsg.plot.parameter{3} );
    zoom out;
    
    % reset map border
    % ----------------
    tsg.preference.map.border = ...
      str2double(tsg.preference.map.border_string(tsg.preference.map.border_value));
    setappdata( hMainFig, 'tsg_data', tsg );
    
    % Set the pointer
    % ---------------
    set( hMainFig, 'Pointer', 'arrow');
    
  end

%% cancelCorrectionCallback .................................... Correction Module
  function cancelCorrectionCallback(src, evnt, Limits)
    % Callback function run when the user want to cancel the
    % corrections made from comparison with bottles or ARGO data.
    % The deletion can be made for th whole time series or
    % between 2 dates.
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomInToggletool,       'state', 'off' );
    set( hZoomOutToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    
    % Get tsg application data
    % ------------------------
    tsg = getappdata(hMainFig, 'tsg_data');
    
    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % or SSPS_CAL, SSJT_CAL, SSTP_CAL
    % -------------------------------------------------
    PARA = getParaCorModule( hMainFig );
    
    % The correction will be cancelled either for the entire
    % time series or within date limits
    % ------------------------------------------------------
    ind = 0;
    switch Limits
      
      % Get the indices of the whole time series
      % ----------------------------------------
      case 'total'
        
        ind = find( tsg.DAYD >= tsg.DAYD(1) &  tsg.DAYD <= tsg.DAYD(end) );
        
        %         ind = size(tsg.([PARA{1} '_ADJUSTED']));
        
        % Get the indices between 2 dates
        % --------------------------------
      case 'part'
        
        % Get the date limits used for the correction
        % -------------------------------------------
        dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
        dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
        
        % Find indices within date limits
        % --------------------------------
        if dateMax > dateMin
          ind = find( tsg.DAYD >= dateMin &  tsg.DAYD <= dateMax );
        end
        
      otherwise
        msgbox( 'CorCancelCallback : error', 'CorCancelCallback', 'error', modal);
    end
    
    if ~isempty(ind) && ~isempty( tsg.([PARA{1} '_ADJUSTED']) )
      
      % Cancel the correction : set the ADJUSTED variable to NaN
      % and ADJUSTED_QC to 0 (Bytes)
      % --------------------------------------------------------
      tsg.([PARA{1} '_ADJUSTED'])(ind) = ...
        NaN*ones(size(tsg.([PARA{1} '_ADJUSTED'])(ind))) ;
      tsg.([PARA{1} '_ADJUSTED_QC'])(ind) = ...
        zeros*ones(size(tsg.([PARA{1} '_ADJUSTED_QC'])(ind))) ;
      tsg.([PARA{1} '_ADJUSTED_ERROR'])(ind) = ...
        NaN*ones(size(tsg.([PARA{1} '_ADJUSTED_ERROR'])(ind))) ;
      
    end
    
    % Save tsg data
    % -------------
    setappdata(hMainFig, 'tsg_data', tsg);
    
    % Plot in the 3 axes
    % ------------------
    plot_Correction( hMainFig, hPlotAxes, PARA );
    
  end


%% gradientCorrectionCallback .................................... Correction Module
  function gradientCorrectionCallback(src, evnt)
    % Callback function run when
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomInToggletool,     'state', 'off' );
    set( hZoomOutToggletool,    'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    
    % Get the time limits for the correction
    % --------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get tsg application data
    % ------------------------
    tsg    = getappdata(hMainFig, 'tsg_data');
    
    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % or SSPS_CAL, SSJT_CAL, SSTP_CAL
    % -------------------------------------------------
    PARA = getParaCorModule( hMainFig );
    SAMPLE = tsg.plot.sample;
    
    if ~isempty( tsg.([SAMPLE '_EXT']) )
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      
      % Correction
      % ----------
      error = corTsgGradient(hMainFig, PARA, dateMin, dateMax);
      
      switch error
        
        case 1
          
          % Plot in the 3 axes
          % ------------------
          plot_Correction( hMainFig, hPlotAxes, PARA );
          
        case -1
          
          if DateMax <= DateMin
            msgbox( 'Date limits are not correct',...
              'Correction module', 'warn', 'modal');
          end
          
      end
      
    end
    
  end

%% biasCorrectionCallback .................................... Correction Module
  function biasCorrectionCallback(src, evnt)
    % Callback function run when
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomInToggletool,     'state', 'off' );
    set( hZoomOutToggletool,    'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    
    % Get the time limits for the correction A TESTER
    % -----------------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get tsg application data
    % ------------------------
    tsg    = getappdata(hMainFig, 'tsg_data');
    
    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % or SSPS_CAL, SSJT_CAL, SSTP_CAL
    % -------------------------------------------------
    PARA = getParaCorModule( hMainFig );
    SAMPLE = tsg.plot.sample;
    
    if ~isempty( tsg.([SAMPLE '_EXT']) )
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      
    end
    
    % Correction
    % ----------
    error = corTsgBias(hMainFig, PARA, dateMin, dateMax);
    
    switch error
      
      case 1
        
        % Plot in the 3 axes
        % ------------------
        plot_Correction( hMainFig, hPlotAxes, PARA );
        
      case -1
        
        if DateMax <= DateMin
          msgbox( 'Date limits are not correct',...
            'Correction module', 'warn', 'modal');
        end
        
      otherwise
        msgbox( 'CorBiasCallback : Error different   or -1',' ', 'error');
        
    end
  end

%% linearCorrectionCallback .................................... Correction Module
  function linearCorrectionCallback(src, evnt)
    % Callback function run when
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomInToggletool,     'state', 'off' );
    set( hZoomOutToggletool,    'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    
    % Get the time limits for the correction A TESTER
    % -----------------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get tsg application data
    % ------------------------
    tsg    = getappdata(hMainFig, 'tsg_data');
    
    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % or SSPS_CAL, SSJT_CAL, SSTP_CAL
    % -------------------------------------------------
    PARA = getParaCorModule( hMainFig );
    SAMPLE = tsg.plot.sample;
    
    if ~isempty( tsg.([SAMPLE '_EXT']) )
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      
      % Correction
      % ----------
      error = corTsgLinear(hMainFig, PARA, dateMin, dateMax);
      
      switch error
        
        case 1
          
          % Plot in the 3 axes
          % ------------------
          plot_Correction( hMainFig, hPlotAxes, PARA );
          
        case -1
          msgbox( 'Date limits are not correct',...
            'Correction module', 'warn', 'modal');
      end
      
    end
    
  end

%% medianCorrectionCallback .................................... Correction Module
  function medianCorrectionCallback(src, evnt)
    % Callback function run when
    
    % Desactivate somme Toggle button
    % -------------------------------
    set( hZoomInToggletool,       'state', 'off' );
    set( hZoomOutToggletool,       'state', 'off' );
    set( hPanToggletool,        'state', 'off' );
    set( hQCToggletool,         'state', 'off' );
    set( hTimelimitToggletool,  'state', 'off' );
    
    % Get the time limits for the correction A TESTER
    % --------------------------------------
    dateMin = datenum(get( hetDateMin, 'String'), 'yyyy-mm-dd HH:MM:SS');
    dateMax = datenum(get( hetDateMax, 'String'), 'yyyy-mm-dd HH:MM:SS');
    
    % Get tsg application data
    % ------------------------
    tsg = getappdata(hMainFig, 'tsg_data');
    
    % Get parameter we are working on (SSPS, SSJT, SSTP)
    % or SSPS_CAL, SSJT_CAL, SSTP_CAL
    % -------------------------------------------------
    PARA = getParaCorModule( hMainFig );
    SAMPLE = tsg.plot.sample;
    
    if ~isempty( tsg.([SAMPLE '_EXT']) )
      
      % Compute the sample-TSG differences
      % ----------------------------------
      diffTsgSample( hMainFig, PARA );
      
      % Correction
      % ----------
      error = corTsgMedian(hMainFig, PARA, dateMin, dateMax);
      
      switch error
        
        case 1
          
          % Plot in the 3 axes
          % ------------------
          plot_Correction( hMainFig, hPlotAxes, PARA );
          
        otherwise
          
          % Nothing is done - Error msg within the corTsgMedian function
      end
      
    end
  end

%% PopupMenu Select Parameter
% POP_UP filled in with the function "initParameterChoice"
% ---------------------------
  function SelectParameter(src, evnt, nplot)
    % Callback function run when the ....
    
    % Get application data
    % --------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    % Get the active string of the selected box
    % -----------------------------------------
    val             = get( src, 'Value' );
    string_list     = get( src, 'String' );
    selected_string = string_list{val};
    
    % Get the default parameter
    % -------------------------
    tsg.plot.parameter{nplot} =  selected_string;
    if nplot == 1
      tsg.plot.sample = selected_string;
      if strcmp( tsg.plot.sample, 'SSJT' )
        tsg.plot.sample = 'SSTP';
      end
    end
    
    % Save application data
    % --------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % Disable the climatology
    % -----------------------
    plotClim = 0;
    if strcmp( get(hClimToggletool, 'state'), 'on' )
      set( hClimToggletool, 'state', 'off' );
      plotClim = 1;
    end
    
    % Disable the climatology
    % -----------------------
    set( hClimToggletool, 'state', 'off' );
    
    plot_Validation( hMainFig, hPlotAxes, 1, tsg.plot.parameter{1} );
    plot_Validation( hMainFig, hPlotAxes, 2, tsg.plot.parameter{2} );
    plot_Validation( hMainFig, hPlotAxes, 3, tsg.plot.parameter{3} );
    
    % Plot the climatology if it was already plotted
    % ----------------------------------------------
    if plotClim
      set( hClimToggletool, 'state', 'on' );
      plot_Climatology(hMainFig, hPlotAxes);
    end
    
  end

%% SelectTime_OnMenuCallback
%---------------------------
  function SelectTime_OnMenuCallback(src, evnt)
    % Callback function run when the ....
    
    % Desactivate Zoom and Pan functions.
    % ----------------------------------
    set( hZoomInToggletool, 'state', 'off' );
    set( hZoomOutToggletool, 'state', 'off' );
    set( hQCToggletool,   'state', 'off' );
    set( hPanToggletool,  'state', 'off' );
    
    % Create a pointer to select the time limits
    % ------------------------------------------
    selTimePointer = ones(16)+1;
    selTimePointer(1,:)       = 1; selTimePointer(16,:)      = 1;
    selTimePointer(:,1)       = 1; selTimePointer(:,16)      = 1;
    selTimePointer(1:4,8:9)   = 1; selTimePointer(13:16,8:9) = 1;
    selTimePointer(8:9,1:4)   = 1; selTimePointer(8:9,13:16) = 1;
    selTimePointer(5:12,5:12) = NaN; % Create a transparent region in the center
    
    % Activate clic mouse menu on second axes (salinity) for next rbbox
    % ----------------------------------------------------------------
    set(hMainFig,'WindowButtonDownFcn', @Time_SelectCallback);
    
    % change cursor
    % ---------------
    set( hMainFig, 'Pointer', 'custom',...
      'PointerShapeCData', selTimePointer, 'PointerShapeHotSpot',[9 9]);
    
    % ----------------------------------------------------------------------
    % nested function on mouse clic when Select Time toggle tool is selected
    % ----------------------------------------------------------------------
    function Time_SelectCallback(src, evnt)
      
      % disable ButtonMotion on main fig during select
      % prevent drawing to map
      % ----------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', []);
      
      % Retrieve named application data
      % -------------------------------
      tsg = getappdata( hMainFig, 'tsg_data');
      
      % Selection of the data within the figure
      % ---------------------------------------
      point1    = get(gca,'CurrentPoint');    % button down detected
      finalRect = rbbox;                      % return figure units
      point2    = get(gca,'CurrentPoint');    % button up detected
      
      point1 = point1(1,1:2);                 % extract x and y
      point2 = point2(1,1:2);
      
      p1 = min(point1,point2);
      p2 = max(point1,point2);                % calculate locations
      
      % get index on selected zone - Only on X axes (time)
      % --------------------------------------------------
      ind = find(tsg.DAYD >= p1(1,1) & tsg.DAYD <= p2(1,1));
      
      % Write the date in the Editable uicontrol
      % ----------------------------------------
      set( hetDateMin, 'String', datestr(tsg.DAYD(ind(1)),   31));
      set( hetDateMax, 'String', datestr(tsg.DAYD(ind(end)), 31));
      
      % enable ButtonMotion on main fig after select QC area
      % ----------------------------------------------------
      set( hMainFig, 'WindowButtonMotionFcn', @MouseMotion);
    end
  end

%% SelectTime_OffMenuCallback
%----------------------------
  function SelectTime_OffMenuCallback(src, evnt)
    % Callback function run when the ....
    
    % Desactivate time limit buttons
    % ------------------------------
    set( hTimelimitToggletool, 'state', 'off');
    
    set( hMainFig, 'WindowButtonDownFcn', []);
    
    set( hMainFig, 'Pointer', 'arrow');
    
  end

%% Clim_OffMenuCallback
%------------------------------------------------------------------------
% Callback function run when the Levitus climatology toolbar is unselected
%------------------------------------------------------------------------
  function Clim_OffMenuCallback(src, evnt)
    
    % Get the tsg struct from the application GUI
    % -------------------------------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    % set climato on map to none (disable)
    % ------------------------------------
    tsg.preference.map.climatology = 'none';
    
    % mask climato range uipanel on map
    set(findobj('tag', 'TAG_MAP_CLIMATO_UIPANEL'),'Visible', 'off');
    % resize map panel for axes
    set(findobj('tag', 'TAG_MAP_CLIMATO_AXES'),'Position',[0, 0, 1, 1])
    
    % Save tsg structure
    % ------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % Get lines handles from tag
    % --------------------------
    hLines = findobj('-regexp', 'Tag', 'TAG_LINE_CLIMATO_');
    
    % disable and check/uncheck climato menu on map
    set(findobj('tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_PCOLOR'),...
      'enable', 'off', 'checked', 'off');
    set(findobj('tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_CONTOURF'),...
      'enable', 'off', 'checked', 'off');
    set(findobj('tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_NONE'),...
      'checked', 'on');
    
    % Delete climatology lines on axes
    % ---------------------------------
    delete(hLines);
    
    % Update the map (if visible)
    % ----------------------------
    if strcmp( get(hMapFig,'visible'), 'on') == 1
      erase_Line( hPlotAxes, 4 );
      plot_map( hMainFig, hPlotAxes);
    end
    
  end

%% Clim_OnMenuCallback
%------------------------------------------------------------------------
% Callback function run when the Levitus climatology toolbar is unselected
%------------------------------------------------------------------------
  function Clim_OnMenuCallback(src, evnt)
    
    % Test if the TSG and bucket files have been read
    % -----------------------------------------------
    if strcmp( get(hOpenMenu, 'UserData'), 'on' )
      
      % Read surface climatology (annual, seasonal or monthly)
      % ------------------------------------------------------
      if read_Climatology(hMainFig)
        
        % enable climato menu on map
        set(findobj('tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_PCOLOR'),'enable', 'on');
        set(findobj('tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_CONTOURF'),'enable', 'on');
        
        % plot climatology
        % ----------------
        plot_Climatology(hMainFig, hPlotAxes);
      end
      
    end
  end

%% ClimatoSelectMenuCallback
% -------------------------------------------------------------------
% Callback function run when climato submenu is selected
% -------------------------------------------------------------------
  function ClimatoSelectMenuCallback(src, evnt, climato, time)
    
    % find all climato submenu and set 'checked' property to 'off'
    % ------------------------------------------------------------
    hdl = findobj( '-regexp', 'tag', 'TAG_UIMENU_CLIMATO');
    set(hdl, 'checked', 'off');
    
    % set current climato submenu checked
    % -----------------------------------
    set(src, 'checked', 'on');
    
    % memorize action on climatology menu for next use
    % ------------------------------------------------
    s.type = climato;
    s.time = time;
    set(hClimatoMenu, 'userdata', s);
    
    % check if climatology toggle button is set
    % -----------------------------------------
    if strcmp(get(hClimToggletool, 'state'), 'on')
      
      % clear last plotted climatology
      % ------------------------------
      Clim_OffMenuCallback;
      
      % Read surface climatology (annual, seasonal or monthly)
      % ------------------------------------------------------
      read_Climatology(hMainFig);
      
      % plot and read (eventually) new climatology
      % ------------------------------------------
      plot_Climatology(hMainFig, hPlotAxes);
    end
    
  end

%% PreferencesMenuCallback
% -------------------------------------------------------------------
% Callback function run when Option/Preference is selected
% -------------------------------------------------------------------
  function PreferencesMenuCallback(src, evnt)
    
    oldmapres=tsg.preference.map.resolution;
    
    % call preferences form function
    % ------------------------------
    if( preferencesForm(hMainFig) )
      
      % if form is validate, update plots only if plot exist
      % ----------------------------------------------------
      if ~isempty(findobj( '-regexp', 'Tag', ('TAG_PLOT\d_LINE_')))
        SelectParameter(pmhPara(1),[],1);
      end
      
      % Update the map (if visible) if ship speed QC has been applied
      % or map resolution has been changed
      % -------------------------------------------------------------
      if (strcmp( get(hMapFig,'visible'), 'on') == 1 & ...
          tsg.preference.map.resolution ~= oldmapres)
        erase_Line( hPlotAxes, 4 );
        plot_map( hMainFig, hPlotAxes);
      end
      
    end
    
  end

%% HelpMenuCallback
% -------------------------------------------------------------------
% Callback function run when Help/Help is selected
% -------------------------------------------------------------------
  function HelpMenuCallback(src, evnt)
    msgbox( 'Function Help not yet implemented', 'warn', 'modal');
  end

%% AboutMenuCallback
% -------------------------------------------------------------------
% Callback function run when Help/About is selected
% -------------------------------------------------------------------
  function AboutMenuCallback(src, evnt)
    %splash('Thermo.jpg', 3000);
    aboutDialog(hMainFig, DEFAULT_PATH_FILE);
  end

%% Map menus
% -----------
  function mapResolutionCallback(src, evnt, resolution)

    % get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    hdls = findobj( '-regexp', 'tag', 'TAG_UIMENU_MAP_RESOLUTION_');
    set(hdls, 'Checked', 'off');  % set all menu off
    set(src, 'Checked', 'on');   % set the menu on
    
    % set map resolution
    % ------------------
    tsg.preference.map.resolution = resolution;
    
    % Save the modifications for use new setting
    % -----------------------------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % redraw map
    % ------------------------------------------
    erase_Line( hPlotAxes, 4 );
    plot_map(hMainFig, hPlotAxes);
  end

  function mapPatchMenuCallback(src, evnt, patch)
    
    % get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    if patch
      % find map with patch submenu and set 'checked' property to 'off'
      % ------------------------------------------------------------
      hdl = findobj( '-regexp', 'tag', 'TAG_UIMENU_MAP_WITHOUT_PATCH');
      set(hdl, 'checked', 'off');
      
      % set current climato submenu checked
      % -----------------------------------
      set(src, 'checked', 'on');
      
      % set tsg.preference for next use
      % ------------------------------------------------
      tsg.preference.map.patch_value = 2;
      
    else
      hdl = findobj( '-regexp', 'tag', 'TAG_UIMENU_MAP_WITH_PATCH');
      set(hdl, 'checked', 'off');
      
      % set current climato submenu checked
      % -----------------------------------
      set(src, 'checked', 'on');
      
      % set tsg.preference for next use
      % ------------------------------------------------
      tsg.preference.map.patch_value = 1;
    end
    
    % Save the modifications for use new setting
    % -----------------------------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % redraw map
    % ------------------------------------------
    erase_Line( hPlotAxes, 4 );
    plot_map(hMainFig, hPlotAxes);
    
  end


% function mapDynaBorderCallback
% --------------------------------
  function mapDynaBorderCallback(src, evnt, border)
    
    % get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    hdls = findobj( '-regexp', 'tag', 'TAG_UIMENU_MAP_BORDER_');
    set(hdls, 'Checked', 'off');
    set(src, 'Checked', 'on');
    
    % change the map border from menu on map
    % --------------------------------------
    tsg.preference.map.border = border;
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % redraw map
    % ------------------------------------------
    erase_Line( hPlotAxes, 4 );
    plot_map(hMainFig, hPlotAxes);
  end

% display 2D climatology on map if pushbutton climato is on
% ---------------------------------------------------------
  function mapClimatologyCallback(src, evnt, climato)
    
    % get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    % check only the selected menu
    % -----------------------------
    hdls = findobj( '-regexp', 'tag', 'TAG_UIMENU_MAP_CLIMATOLOGY_WITH_');
    set(hdls, 'Checked', 'off');
    set(src, 'Checked', 'on');
    
    % change the map 2D climatology from menu on map
    % ----------------------------------------------
    tsg.preference.map.climatology = climato;
    
    % save tsg.preference.map.climatology
    % -----------------------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % redraw map
    % ------------------------------------------
    erase_Line( hPlotAxes, 4 );
    plot_map(hMainFig, hPlotAxes);
    
  end

% call when user change range value for contourf climato on map
% -------------------------------------------------------------
  function mapContourfCallback(src, evnt, type)
    
    % get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    
    % change the map 2D climatology from menu on map
    % ----------------------------------------------
    tsg.preference.map.climato.(tsg.plot.sample).(type) = str2double(get(src,'string'));
    
    % save tsg.preference.map.climatology
    % -----------------------------------
    setappdata( hMainFig, 'tsg_data', tsg);
    
    % redraw map
    % ------------------------------------------
    erase_Line( hPlotAxes, 4 );
    plot_map(hMainFig, hPlotAxes);
    
  end

% print map figure from menu
% ----------------------------
  function mapPrintCallback(src, evnt)
    printdlg(get(hPlotAxes(4),'parent'));
  end

  function mapPrintPreviewCallback(src, evnt)
    printpreview(get(hPlotAxes(4),'parent'));
  end

  % save the map as image file
  % --------------------------
  function mapSaveAsCallback(src, evnt)
    [file, path] = uiputfile({'*.jpeg';'*.png';'*.pdf';'*.tiff';'*.bmp';'*.eps'});
    if file == 0
      return
    end
    fprintf(1, 'Save figure map as %s\n', fullfile(path,file));
    saveas(get(hPlotAxes(4),'parent'), fullfile(path,file));
  end


%% HeaderMenuCallback
% -------------------------------------------------------------------
% Callback function run when the headerForm tool bar item is selected
% -------------------------------------------------------------------
  function HeaderMenuCallback(src, evnt)
    
    % call header form function
    % -------------------------
    headerForm(hMainFig);
    
  end

%% PrintFigMenuCallback
% -------------------------------------------------------------------
% Callback function run when the Report tool bar item is selected
% -------------------------------------------------------------------
  function PrintFigMenuCallback(src, evnt)
    
    % disable ButtonMotion on main fig during select
    % ----------------------------------------------
    set( hMainFig, 'WindowButtonMotionFcn', []);
    
    % Get the tsg structure
    % ---------------------
    tsg = getappdata( hMainFig, 'tsg_data');
    
    
    hPrintFig = figure( 'Name', 'Print','NumberTitle', 'off','Resize', 'on');
    hPlot(1) = subplot(3,1,1);
    hPlot(2) = subplot(3,1,2);
    hPlot(3) = subplot(3,1,3);
    title( hPlot(1), tsg.file.name, 'interpreter', 'none');
    
    if strcmp(get(hBottleToggletool,'state'), 'on')