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Created with Raphaël 2.2.020Mar29Jun27Mar2417115Dec521Nov184Apr31Mar291527Jan26252Nov25Oct2219181514121187remove big files for lighter archivemainmainRelease v.2023.06Release v.2023.06Create unique RQC conda env with all updated toolsEdit quality_control.smk : fastq-screen use only 'bwa'Edit quality_control.smk : fastq-screen use only 'bwa'Edit README.md : change Git path from transvihmi/ dir to nfernande/ subdirEdit README.mdEdit README.mdUpdate Snakemake-base env. (like geVarLi)Add results archivesRemove larger genomesAdd genomesUpdate v.2022.11Update v.2022.11Update v.2022.11Update v.2022.11Update v.2022.11Update v.2022.11Update v.2022.11Add --rerun-incompleteFastqc and Fastq-screen rule by sampleFastqc and Fastq-screen rule by sampleFastqc and Fastq-screen rule by samplePassing testsChange bash script nameAdd LICENSEDelete fastq-join-1.3.1.yamlDelete cutadapt-3.5.yamlDelete sickle-trim-1.33.yamlUpdate README.mdUpdate resources/reads/.gitkeepAdd reads directoryDelete .gitkeepUpdate reads/.gitkeepAdd reads directoryUpdate README.mdUpdate README.mdImage of rulegraphWorking on README.md
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