Commits · b3eeb7251cd99a79f0446630b3b0aed65bfa44fb · TRANSVIHMI / nfernandez / GeVarLi · GitLab

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Nov 28, 2024
- Fix: add public/ dir to .gitignore · 72c17980
  nicolas.fernandez_ird.fr authored 4 months ago
  
  72c17980
Jan 29, 2024
- Fix: pass '--no-mq' lofreq option by default · c4273fb6
  nicolas.fernandez_ird.fr authored 1 year ago
  
  c4273fb6
Oct 26, 2023
- Add network check · d941837f
  nicolas.fernandez_ird.fr authored 1 year ago
  
  d941837f
Aug 21, 2023
- feat: add loa loa reference genome · 7afb725f
  nicolas.fernandez_ird.fr authored 1 year ago
  
  7afb725f
Jan 24, 2023
- Edit README.md (citation author affiliation) & .gitignore (/archives dir) · 58395eb8
  nicolas.fernandez_ird.fr authored 2 years ago
  
  58395eb8
Jan 04, 2023
- Allow data_test reads · 8297a535
  nicolas.fernandez_ird.fr authored 2 years ago
  
  8297a535
Dec 08, 2022
- Test new .gitignore · db79a6ef
  nicolas.fernandez_ird.fr authored 2 years ago
  
  db79a6ef
Dec 07, 2022
- Compression correction for achive with tar.gz · 73d2eead
  nicolas.fernandez_ird.fr authored 2 years ago
  
  73d2eead
Nov 23, 2022
- remove results archive gz test dir · faad4b03
  Nicolas Fernandez authored 2 years ago
  
  faad4b03
Nov 22, 2022
- Update Pangolin to v.4.1.3 (from 4.0.6)) · 052749d6
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  052749d6
Nov 04, 2022
- Try Snakemake 7.18.1 and adding GraphViz as tool for dot function · 65c2db3a
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  65c2db3a
- Minor code layout update · c21e1697
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  c21e1697
Oct 06, 2022
- Remove bedpe generation · 8127fc50
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  8127fc50
Oct 04, 2022
- edit .gitignore · 7b59cf3f
  Nicolas Fernandez authored 2 years ago
  
  7b59cf3f
Sep 30, 2022
- Add features like genomes indexing and bamclipping · 1373c03f
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  1373c03f
Aug 30, 2022
- Merge MacOSX and Linux script versions in one repo · 111ea5b2
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  111ea5b2
Jul 27, 2022
- Test .gitignore · 8124c4a9
  Nicolas FERNANDEZ NUÑEZ authored 2 years ago
  
  8124c4a9
Dec 10, 2021
- Change .gitignore · 02baad39
  Nicolas FERNANDEZ NUÑEZ authored 3 years ago
  
  02baad39
Dec 03, 2021
- Change fastqvar name 'reverse' in snakefile because updating snakemake 5.11.2 to 6.12.1 · a4713ddd
  Nicolas FERNANDEZ NUÑEZ authored 3 years ago
  
  a4713ddd
Nov 30, 2021
- Initial commit · aaacb0f8
  Nicolas FERNANDEZ NUÑEZ authored 3 years ago
  
  aaacb0f8