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Commit dc42574d authored by nicolas.fernandez_ird.fr's avatar nicolas.fernandez_ird.fr :shinto_shrine:
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Doc: add new shell code typo

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...@@ -15,7 +15,8 @@ GeVarLi use the use the free and open-source package manager **Conda**. ...@@ -15,7 +15,8 @@ GeVarLi use the use the free and open-source package manager **Conda**.
Otherwise, you can **download** and **install** the [latest version of Miniforge](https://github.com/conda-forge/miniforge/releases) for your specific OS. Otherwise, you can **download** and **install** the [latest version of Miniforge](https://github.com/conda-forge/miniforge/releases) for your specific OS.
!!! Example script for Linux\_x86\_64-bit** or Windows Subsystem for Linux (WSL) systems !!! shell
Example bash script for Linux\_x86\_64-bit** or Windows Subsystem for Linux (WSL) systems
```shell ```shell
# Download # Download
curl -L -O https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh curl -L -O https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh
......
...@@ -10,33 +10,3 @@ ...@@ -10,33 +10,3 @@
<div style="text-align: center;"> <div style="text-align: center;">
<img src="../../../images/GeVarLi_by_DALL-E_icone.png" width="100" height="100"> <img src="../../../images/GeVarLi_by_DALL-E_icone.png" width="100" height="100">
</div> </div>
## Tests en cours...
!!! note
Ceci est une note
!!! tip
Ceci est une astuce
!!! important
Ceci est important
!!! warning
Ceci est un warning
!!! caution
Ceci est une mise en garde
!!! test
Ceci est un **test**
!!! code
Ceci est du ```code```
!!! bloc de code
TEST
```shell
Ceci est un bloc
```
...@@ -15,33 +15,35 @@ GeVarLi utilise le gestionnaire de paquets gratuit et open-source **Conda**. ...@@ -15,33 +15,35 @@ GeVarLi utilise le gestionnaire de paquets gratuit et open-source **Conda**.
Sinon, vous pouvez **télécharger** et **installer** la [dernière version de Miniforge](https://github.com/conda-forge/miniforge/releases) spécifique à votre système d'exploitation. Sinon, vous pouvez **télécharger** et **installer** la [dernière version de Miniforge](https://github.com/conda-forge/miniforge/releases) spécifique à votre système d'exploitation.
_Exemple de script pour les systèmes Linux\_x86\_64 bits ou Sous-système Windows pour Linux (WSL)_ !!! shell
```shell Exemple de script bash pour les systèmes Linux\_x86\_64 bits ou Sous-système Windows pour Linux (WSL)
# Download ```shell
curl -L -O https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh # Download
curl -L -O https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh
# Install
bash ./Miniforge3-Linux-x86_64.sh -b -p ~/miniforge3/ # Install
bash ./Miniforge3-Linux-x86_64.sh -b -p ~/miniforge3/
# Clean
rm -f ./Miniforge3-Linux-x86_64.sh # Clean
rm -f ./Miniforge3-Linux-x86_64.sh
# Configure
~/miniforge3/condabin/conda config --add channels bioconda # Configure
/miniforge3/condabin/conda config --add channels conda-forge ~/miniforge3/condabin/conda config --add channels bioconda
~/miniforge3/condabin/conda config --set channel_priority strict /miniforge3/condabin/conda config --add channels conda-forge
~/miniforge3/condabin/conda config --set auto_activate_base false ~/miniforge3/condabin/conda config --set channel_priority strict
~/miniforge3/condabin/conda config --set auto_activate_base false
# Update
~/miniforge3/condabin/conda update conda --yes # Update
~/miniforge3/condabin/conda update conda --yes
# Check install
~/miniforge3/condabin/conda --version # Check install
~/miniforge3/condabin/conda config --show channels ~/miniforge3/condabin/conda --version
~/miniforge3/condabin/conda config --show channels
# Init
~/miniforge3/condabin/conda init
```
# Init
~/miniforge3/condabin/conda init
```
!!! warning !!! warning
Nous vous recommandons fortement de **définir des canaux** et de **mettre à jour** ! Nous vous recommandons fortement de **définir des canaux** et de **mettre à jour** !
!!! note !!! note
......
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