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a13f7f5d

Commit a13f7f5d authored 3 months ago by nicolas.fernandez_ird.fr

:shinto_shrine:

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Feat: return to the modular rules.smk

parent 40167f50

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workflow/rules/quality_controls.smk 4 additions, 65 deletions

workflow/rules/quality_controls.smk
workflow/rules/reads_cleaning.smk 91 additions, 0 deletions

workflow/rules/reads_cleaning.smk
workflow/rules/reads_mapping.smk 120 additions, 0 deletions

workflow/rules/reads_mapping.smk
workflow/rules/remove_duplicates.smk 160 additions, 0 deletions

workflow/rules/remove_duplicates.smk
workflow/rules/variant_calling.smk 142 additions, 0 deletions

workflow/rules/variant_calling.smk
workflow/schemas/config.schema.yaml 0 additions, 0 deletions

workflow/schemas/config.schema.yaml
workflow/scripts/__pycache__/__init__.cpython-312.pyc 0 additions, 0 deletions

workflow/scripts/__pycache__/__init__.cpython-312.pyc
workflow/scripts/__pycache__/functions.cpython-312.pyc 0 additions, 0 deletions

workflow/scripts/__pycache__/functions.cpython-312.pyc
workflow/scripts/functions.py 127 additions, 0 deletions

workflow/scripts/functions.py

with 644 additions and 65 deletions

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