Skip to content
Snippets Groups Projects
Commit 5b525a40 authored by nicolas.fernandez_ird.fr's avatar nicolas.fernandez_ird.fr :shinto_shrine:
Browse files

Feature: add ivar.tsv 2 .vcf files

parent 32467329
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
configuration/config.yaml
+ 3
− 3
View file @ 5b525a40
......@@ -78,12 +78,12 @@ consensus:
aligner: # Select your favorite aligner (default: 'minimap2')
# Available options, choose one:
- 'minimap2' # A versatile sequence alignment program (default)
- 'bwa' # Better, Faster, (Stronger, Harder...)
- 'bowtie2' # Depreciated (slower),"sensitivity" requiried (see below "Bowtie2" options)
#- 'bwa' # Better, Faster, (Stronger, Harder...)
#- 'bowtie2' # Depreciated (slower),"sensitivity" requiried (see below "Bowtie2" options)
caller: # Select your favorite variants caller (default: 'lofreq')
# Available options, choose one:
- 'lofreq' #
- 'ivar' #
#- 'ivar' #
###############################################################################
### NEXTCLADE ###
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment