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Commit d9a74523 authored by aurore.comte_ird.fr's avatar aurore.comte_ird.fr
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ajout envs

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name: Star
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- star=2.7.6a
\ No newline at end of file
name: gffread
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- gffread=0.12.1
\ No newline at end of file
name: hisat2
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- hisat2=2.2.1
name: htseq
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- htseq=0.12.4
name: picard
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- picard=2.23.8
\ No newline at end of file
name: quality
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- fastp=0.20.1
- fastqc=0.11.9
- fastq-screen=0.14
- multiqc=1.9
name: samtools
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- samtools=1.11
\ No newline at end of file
name: stringtie
channels:
- bioconda
- conda-forge
- defaults
- anaconda
dependencies:
- stringtie=2.1.4
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