Delete configPT.yaml

Scripts/configPT.yaml

-# Dossiers que l'on va utiliser
-
-'REFERENCE': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/01_Genome/"
-'FASTA': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/01_Genome/plasmodb_pfalciparum3d7_genome.fasta"
-'GFF': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/01_Genome/plasmodb-46_pfalciparum3d7.gff"
-'GTF': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/01_Genome/plasmodb-46_pfalciparum3d7.gtf"
-'READS': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/02_RawData/"
-'FASTQC': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/03_FastQC/"
-'FASTQSCREEN': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/04_FastQScreen/"
-'FASTP': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/05_FastP/"
-'FASTQC_AF': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/06_FastQC_AfterFT/"
-'MULTIQC': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/07_MultiQC/"
-'INDEX': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/08_Index_HISAT_3D7/"
-'MAPPINGH': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/09_Mapping_HISAT_3D7/"
-'INDEX_STAR': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/10_Index_STAR_3D7/"
-'MAPPING_STAR': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/11_Mapping_STAR_3D7/"
-'BAMFILES': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/12_BAMfiles/"
-'STATS': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/14_Stats_BAM/"
-'FILTER': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/13_Filtered_BAM/"
-'DUPL': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/15_MarkedDupli_BAM/"
-'HTSEQ': "/Users/COHEN/Documents/BulKRNA/TestSnakeMake/16_HTseq-count/"
-
-###Options des logiciels