bash-0-setup.md

Setup

First copy and paste this command to execute it. No worries not need to understand what it does.

course={{extra.working_directory}}
mkdir -p ~/$course/script
mkdir -p ~/$course/data
echo "Welcome to the {{extra.working_directory}} course" > ~/$course/README
echo "echo hello" >  ~/$course/script/script1.sh 
echo "ATGC" >  ~/$course/data/data1.fa
touch  ~/$course/data/dataA.fastq
touch  ~/$course/data/dataB.fastq
cd $course
echo "done"

The command above prepare a {{extra.working_directory}} directory with material.