workflow.config

// Set your work directory to a folder on the /active partition
workDir = '/scratch/dainat/work'
// Restart workflows from last successful execution (i.e. use cached results where possible).
resume = true
// Use a shared cache folder singularity images
singularity.cacheDir = '/scratch/dainat/nxf_singularity_cachedir'
// If using conda, use a shared cache for conda environments
conda.cacheDir = '/scratch/dainat/nxf_conda_cachedir'
// Use mamba for speed over conda
conda.useMamba = true