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<div id="refs" class="references csl-bib-body hanging-indent" role="doc-bibliography">
<div id="ref-JS-Leaflet" class="csl-entry" role="doc-biblioentry">
Agafonkin, Vladimir. 2015. <span>“Leaflet Javascript Libary.”</span>
</div>
<div id="ref-scanstatistics" class="csl-entry" role="doc-biblioentry">
Allévius, Benjamin. 2018. <span>“Scanstatistics: Space-Time Anomaly
Detection Using Scan Statistics.”</span> <em>Journal of Open Source
Software</em> 3 (25): 515.
</div>
<div id="ref-mapview" class="csl-entry" role="doc-biblioentry">
Appelhans, Tim, Florian Detsch, Christoph Reudenbach, and Stefan
Woellauer. 2022. <span>“Mapview: Interactive Viewing of Spatial Data in
r.”</span> <a href="https://CRAN.R-project.org/package=mapview">https://CRAN.R-project.org/package=mapview</a>.
</div>
<div id="ref-mapedit" class="csl-entry" role="doc-biblioentry">
Appelhans, Tim, Kenton Russell, and Lorenzo Busetto. 2020.
<span>“Mapedit: Interactive Editing of Spatial Data in r.”</span> <a href="https://CRAN.R-project.org/package=mapedit">https://CRAN.R-project.org/package=mapedit</a>.
</div>
<div id="ref-bivand2008applied" class="csl-entry" role="doc-biblioentry">
Bivand, Roger S, Edzer J Pebesma, Virgilio Gómez-Rubio, and Edzer Jan
Pebesma. 2008. <em>Applied Spatial Data Analysis with r</em>. Vol.
747248717. Springer.
</div>
<div id="ref-spdep" class="csl-entry" role="doc-biblioentry">
Bivand, Roger, Micah Altman, Luc Anselin, Renato Assunção, Olaf Berke,
Andrew Bernat, and Guillaume Blanchet. 2015. <span>“Package
<span>‘Spdep’</span>.”</span> <em>The Comprehensive R Archive
Network</em>.
</div>
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
<div id="ref-rgdal" class="csl-entry" role="doc-biblioentry">
Bivand, Roger, Tim Keitt, and Barry Rowlingson. 2022. <span>“Rgdal:
Bindings for the ’Geospatial’ Data Abstraction Library.”</span> <a href="https://CRAN.R-project.org/package=rgdal">https://CRAN.R-project.org/package=rgdal</a>.
</div>
<div id="ref-rgeos" class="csl-entry" role="doc-biblioentry">
Bivand, Roger, and Colin Rundel. 2021. <span>“Rgeos: Interface to
Geometry Engine - Open Source (’GEOS’).”</span> <a href="https://CRAN.R-project.org/package=rgeos">https://CRAN.R-project.org/package=rgeos</a>.
</div>
<div id="ref-Brunet93" class="csl-entry" role="doc-biblioentry">
Brunet, Roger, Robert Ferras, and Hervé Théry. 1993. <em>Les Mots de La
g<span>é</span>ographie: Dictionnaire Critique</em>. 03) 911 BRU.
</div>
<div id="ref-tidygeocoder" class="csl-entry" role="doc-biblioentry">
Cambon, Jesse, Diego Hernangómez, Christopher Belanger, and Daniel
Possenriede. 2021. <span>“Tidygeocoder: An r Package for
Geocoding”</span> 6: 3544. <a href="https://doi.org/10.21105/joss.03544">https://doi.org/10.21105/joss.03544</a>.
</div>
<div id="ref-Cauvin13" class="csl-entry" role="doc-biblioentry">
Cauvin, Colette, Francisco Escobar, and Aziz Serradj. 2013. <em>Thematic
Cartography, Cartography and the Impact of the Quantitative
Revolution</em>. Vol. 2. John Wiley & Sons.
</div>
<div id="ref-leaflet" class="csl-entry" role="doc-biblioentry">
Cheng, Joe, Bhaskar Karambelkar, and Yihui Xie. 2022. <span>“Leaflet:
Create Interactive Web Maps with the JavaScript ’Leaflet’
Library.”</span> <a href="https://CRAN.R-project.org/package=leaflet">https://CRAN.R-project.org/package=leaflet</a>.
</div>
<div id="ref-R-rgeoboundaries" class="csl-entry" role="doc-biblioentry">
Dicko, Ahmadou. 2021. <em>R Client for the geoBoundaries API, Providing
Country Political Administrative Boundaries</em>. <a href="https://dickoa.gitlab.io/rgeoboundaries/index.html">https://dickoa.gitlab.io/rgeoboundaries/index.html</a>.
</div>
<div id="ref-Dorling96" class="csl-entry" role="doc-biblioentry">
Dorling, Daniel. 1996. <em>Area Cartograms: Their Use and Creation,
Concepts and Techniques in Modern Geography</em>. Vol. 59. CATMOG:
Concepts and Techniques in Modern Geography. Institute of British
Geographers.
</div>
<div id="ref-Dougenik85" class="csl-entry" role="doc-biblioentry">
Dougenik, James A, Nicholas R Chrisman, and Duane R Niemeyer. 1985.
<span>“An Algorithm to Construct Continuous Area Cartograms.”</span>
<em>The Professional Geographer</em> 37 (1): 75–81.
</div>
<div id="ref-ggspatial" class="csl-entry" role="doc-biblioentry">
Dunnington, Dewey. 2021. <span>“Ggspatial: Spatial Data Framework for
Ggplot2.”</span> <a href="https://CRAN.R-project.org/package=ggspatial">https://CRAN.R-project.org/package=ggspatial</a>.
</div>
<div id="ref-GDAL" class="csl-entry" role="doc-biblioentry">
GDAL/OGR contributors. n.d. <em><span>GDAL/OGR</span> Geospatial Data
Abstraction Software Library</em>. Open Source Geospatial Foundation. <a href="https://gdal.org">https://gdal.org</a>.
</div>
<div id="ref-osmextract" class="csl-entry" role="doc-biblioentry">
Gilardi, Andrea, and Robin Lovelace. 2021. <span>“Osmextract: Download
and Import Open Street Map Data Extracts.”</span> <a href="https://CRAN.R-project.org/package=osmextract">https://CRAN.R-project.org/package=osmextract</a>.
</div>
<div id="ref-linemap" class="csl-entry" role="doc-biblioentry">
Giraud, Timothée. 2021a. <span>“Linemap: Line Maps.”</span> <a href="https://CRAN.R-project.org/package=linemap">https://CRAN.R-project.org/package=linemap</a>.
</div>
<div id="ref-maptiles" class="csl-entry" role="doc-biblioentry">
———. 2021b. <span>“Maptiles: Download and Display Map Tiles.”</span> <a href="https://CRAN.R-project.org/package=maptiles">https://CRAN.R-project.org/package=maptiles</a>.
</div>
<div id="ref-mapsf" class="csl-entry" role="doc-biblioentry">
———. 2022a. <span>“Mapsf: Thematic Cartography.”</span> <a href="https://CRAN.R-project.org/package=mapsf">https://CRAN.R-project.org/package=mapsf</a>.
</div>
<div id="ref-tanaka" class="csl-entry" role="doc-biblioentry">
———. 2022b. <span>“Tanaka: Design Shaded Contour Lines (or Tanaka)
Maps.”</span> <a href="https://CRAN.R-project.org/package=tanaka">https://CRAN.R-project.org/package=tanaka</a>.
</div>
<div id="ref-cartography" class="csl-entry" role="doc-biblioentry">
Giraud, Timothée, and Nicolas Lambert. 2016. <span>“Cartography: Create
and Integrate Maps in Your r Workflow”</span> 1. <a href="https://doi.org/10.21105/joss.00054">https://doi.org/10.21105/joss.00054</a>.
</div>
<div id="ref-banR" class="csl-entry" role="doc-biblioentry">
Gombin, Joel, and Paul-Antoine Chevalier. 2022. <span>“banR: R Client
for the BAN API.”</span>
</div>
<div id="ref-DCluster" class="csl-entry" role="doc-biblioentry">
Gómez-Rubio, Virgilio, Juan Ferrándiz-Ferragud, Antonio López-Quı́lez, et
al. 2015. <span>“Package <span>‘DCluster’</span>.”</span>
</div>
<div id="ref-R-gadmr" class="csl-entry" role="doc-biblioentry">
Guevarra, Ernest. 2021. <em>Gadmr: An r Interface to the GADM Map
Repository</em>. <a href="https://github.com/SpatialWorks/gadmr">https://github.com/SpatialWorks/gadmr</a>.
</div>
<div id="ref-raster" class="csl-entry" role="doc-biblioentry">
Hijmans, Robert J. 2022a. <span>“Raster: Geographic Data Analysis and
Modeling.”</span> <a href="https://CRAN.R-project.org/package=raster">https://CRAN.R-project.org/package=raster</a>.
</div>
<div id="ref-terra" class="csl-entry" role="doc-biblioentry">
———. 2022b. <span>“Terra: Spatial Data Analysis.”</span> <a href="https://CRAN.R-project.org/package=terra">https://CRAN.R-project.org/package=terra</a>.
</div>
<div id="ref-cartogram" class="csl-entry" role="doc-biblioentry">
Jeworutzki, Sebastian. 2020. <span>“Cartogram: Create Cartograms with
r.”</span> <a href="https://CRAN.R-project.org/package=cartogram">https://CRAN.R-project.org/package=cartogram</a>.
</div>
<div id="ref-SpatialEpi" class="csl-entry" role="doc-biblioentry">
Kim, Albert Y, and Jon Wakefield. 2010. <span>“R Data and Methods for
Spatial Epidemiology: The SpatialEpi Package.”</span> <em>Dept of
Statistics, University of Washington</em>.
</div>
<div id="ref-Lambert15" class="csl-entry" role="doc-biblioentry">
Lambert, Nicolas. 2015. <span>“Les Anamorphoses Cartographiques.”</span>
Blog. <em>Carnet Néocartographique</em>. <a href="https://neocarto.hypotheses.org/366" class="uri">https://neocarto.hypotheses.org/366</a>.
</div>
<div id="ref-XingongLi2009" class="csl-entry" role="doc-biblioentry">
Li, Xingong. 2009. <span>“Map Algebra and Beyond : 1. Map Algebra for
Scalar Fields.”</span> <a href="https://slideplayer.com/slide/5822638/" class="uri">https://slideplayer.com/slide/5822638/</a>.
</div>
<div id="ref-MmadelinSIGR" class="csl-entry" role="doc-biblioentry">
Madelin, Malika. 2021. <span>“Analyse d’images Raster (Et
Télédétection).”</span> <a href="https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html" class="uri">https://mmadelin.github.io/sigr2021/SIGR2021_raster_MM.html</a>.
</div>
<div id="ref-JMennis2015" class="csl-entry" role="doc-biblioentry">
Mennis, Jeremy. 2015. <span>“Fundamentals of GIS : Raster
Operations.”</span> <a href="https://cupdf.com/document/gus-0262-fundamentals-of-gis-lecture-presentation-7-raster-operations-jeremy.html" class="uri">https://cupdf.com/document/gus-0262-fundamentals-of-gis-lecture-presentation-7-raster-operations-jeremy.html</a>.
</div>
<div id="ref-JNowosadSIGR" class="csl-entry" role="doc-biblioentry">
Nowosad, Jakub. 2021. <span>“Image Processing and All Things
Raster.”</span> <a href="https://nowosad.github.io/SIGR2021/workshop2/workshop2.html" class="uri">https://nowosad.github.io/SIGR2021/workshop2/workshop2.html</a>.
</div>
<div id="ref-Olson76" class="csl-entry" role="doc-biblioentry">
Olson, Judy M. 1976. <span>“Noncontiguous Area Cartograms.”</span>
<em>The Professional Geographer</em> 28 (4): 371–80.
</div>
<div id="ref-osmdata" class="csl-entry" role="doc-biblioentry">
Padgham, Mark, Bob Rudis, Robin Lovelace, and Maëlle Salmon. 2017a.
<span>“Osmdata”</span> 2. <a href="https://doi.org/10.21105/joss.00305">https://doi.org/10.21105/joss.00305</a>.
</div>
<div id="ref-osmdata2017" class="csl-entry" role="doc-biblioentry">
———. 2017b. <span>“Osmdata.”</span> <em>The Journal of Open Source
Software</em> 2 (14). <a href="https://doi.org/10.21105/joss.00305">https://doi.org/10.21105/joss.00305</a>.
</div>
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
<div id="ref-Paull16" class="csl-entry" role="doc-biblioentry">
Paull, John, and Benjamin Hennig. 2016. <span>“Atlas of Organics: Four
Maps of the World of Organic Agriculture.”</span> <em>Journal of
Organics</em> 3 (1): 25–32.
</div>
<div id="ref-sf" class="csl-entry" role="doc-biblioentry">
Pebesma, Edzer. 2018b. <span>“<span></span>Simple Features for r:
Standardized Support for Spatial Vector Data<span></span>”</span> 10. <a href="https://doi.org/10.32614/RJ-2018-009">https://doi.org/10.32614/RJ-2018-009</a>.
</div>
<div id="ref-pebesma2018" class="csl-entry" role="doc-biblioentry">
———. 2018a. <span>“Simple Features for R: Standardized Support for
Spatial Vector Data.”</span> <em>The R Journal</em> 10 (1): 439. <a href="https://doi.org/10.32614/rj-2018-009">https://doi.org/10.32614/rj-2018-009</a>.
</div>
<div id="ref-stars" class="csl-entry" role="doc-biblioentry">
———. 2021. <span>“Stars: Spatiotemporal Arrays, Raster and Vector Data
Cubes.”</span> <a href="https://CRAN.R-project.org/package=stars">https://CRAN.R-project.org/package=stars</a>.
</div>
<div id="ref-sp" class="csl-entry" role="doc-biblioentry">
Pebesma, Edzer J., and Roger S. Bivand. 2005. <span>“Classes and Methods
for Spatial Data in <span></span>r<span></span>”</span> 5. <a href="https://CRAN.R-project.org/doc/Rnews/">https://CRAN.R-project.org/doc/Rnews/</a>.
</div>
<div id="ref-PROJ" class="csl-entry" role="doc-biblioentry">
PROJ contributors. 2021. <em><span>PROJ</span> Coordinate Transformation
Software Library</em>. Open Source Geospatial Foundation. <a href="https://proj.org/">https://proj.org/</a>.
</div>
<div id="ref-RasterCheatSheet" class="csl-entry" role="doc-biblioentry">
Racine, Etienne B. 2016. <span>“The Visual Raster Cheat Sheet.”</span>
<a href="https://rpubs.com/etiennebr/visualraster" class="uri">https://rpubs.com/etiennebr/visualraster</a>.
</div>
<div id="ref-R-geonames" class="csl-entry" role="doc-biblioentry">
Rowlingson, Barry. 2019. <em>Geonames: Interface to the "Geonames"
Spatial Query Web Service</em>. <a href="https://CRAN.R-project.org/package=geonames">https://CRAN.R-project.org/package=geonames</a>.
</div>
<div id="ref-rnaturalearth" class="csl-entry" role="doc-biblioentry">
South, Andy. 2017. <span>“Rnaturalearth: World Map Data from Natural
Earth.”</span> <a href="https://CRAN.R-project.org/package=rnaturalearth">https://CRAN.R-project.org/package=rnaturalearth</a>.
</div>
<div id="ref-tanaka1950" class="csl-entry" role="doc-biblioentry">
Tanaka, Kitiro. 1950. <span>“The Relief Contour Method of Representing
Topography on Maps.”</span> <em>Geographical Review</em> 40 (3): 444. <a href="https://doi.org/10.2307/211219">https://doi.org/10.2307/211219</a>.
</div>
<div id="ref-tmap" class="csl-entry" role="doc-biblioentry">
Tennekes, Martijn. 2018. <span>“<span></span>Tmap<span></span>: Thematic
Maps in <span></span>r<span></span>”</span> 84. <a href="https://doi.org/10.18637/jss.v084.i06">https://doi.org/10.18637/jss.v084.i06</a>.
</div>
<div id="ref-Tomlin_1990" class="csl-entry" role="doc-biblioentry">
Tomlin, C. Dana. 1990. <em>Geographic Information Systems and
Cartographic Modeling</em>. Prentice Hall.
</div>
<div id="ref-R-cshapes" class="csl-entry" role="doc-biblioentry">
Weidmann, Nils B., Guy Schvitz, and Luc Girardin. 2021. <em>Cshapes: The
CShapes 2.0 Dataset and Utilities</em>. <a href="https://CRAN.R-project.org/package=cshapes">https://CRAN.R-project.org/package=cshapes</a>.
</div>
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504
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506
507
508
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510
511
512
513
514
515
516
517
518
519
520
521
<div id="ref-ggplot2" class="csl-entry" role="doc-biblioentry">
Wickham, Hadley. 2016. <span>“Ggplot2: Elegant Graphics for Data
Analysis.”</span> <a href="https://ggplot2.tidyverse.org">https://ggplot2.tidyverse.org</a>.
</div>
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