return 0/1 instead of AB in vcf

noisyplotype.py

@@ -109,7 +109,7 @@ def generate_chr_for_one_ind (chromosome_size, marker_density, err_rate, mean_de
         #print("reads",genotype1, genotype2)
         #print(genotype)
         # Append the genotype and the depth of the current marker to the segment list
-        finalGenotype = str(genotype1) + str(genotype2) + ":" + str(site_depth) + ":" + str(x) + "," + str(y) + ":.:.:.:.:.:."
+        finalGenotype = str(genotype) + ":" + str(site_depth) + ":" + str(x) + "," + str(y) + ":.:.:.:.:.:."
         segment.append(finalGenotype)
 
     return segment