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Commit f197f794 authored by nina.marthe_ird.fr's avatar nina.marthe_ird.fr
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added info of the required input

parent 50e418ae
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...@@ -10,10 +10,10 @@ from Functions_output import * ...@@ -10,10 +10,10 @@ from Functions_output import *
import sys import sys
if not(len(sys.argv)>=4) :# intersect, gfa, pos_seg (target_genome_name) if not(len(sys.argv)>=4) :# intersect, gfa, pos_seg (target_genome_name)
print("expected input : intersect, gfa file with walks, bed file with positions of the segments on the target genome") print("expected input : intersect, gfa file with walks, bed file with positions of the segments on the target genome, and the name of the walk of the target genome")
sys.exit(1) sys.exit(1)
elif (sys.argv[1]=="-h") : elif (sys.argv[1]=="-h") :
print("expected input : intersect, gfa file with walks, bed file with positions of the segments on the target genome") print("expected input : intersect, gfa file with walks, bed file with positions of the segments on the target genome, and the name of the walk of the target genome")
print("output : graph gff, graph gaf, target genome gff+variations") print("output : graph gff, graph gaf, target genome gff+variations")
sys.exit(1) sys.exit(1)
......
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