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DIADE
dynadiv
GrAnnoT
Commits
67f43ab1
Commit
67f43ab1
authored
1 year ago
by
nina.marthe_ird.fr
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corrected the use of the graph path
parent
5f4627ae
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argparser.py
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argparser.py
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argparser.py
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67f43ab1
...
@@ -53,7 +53,7 @@ def read_args(args):
...
@@ -53,7 +53,7 @@ def read_args(args):
path_list
.
append
(
args
.
source_genome
)
path_list
.
append
(
args
.
source_genome
)
if
args
.
segment_coordinates_path
==
"
.
"
:
if
args
.
segment_coordinates_path
==
"
.
"
:
print
(
"
run getSegCoord.py
"
)
print
(
"
run getSegCoord.py
"
)
seg_coord
(
"
RiceGraph_cactus.gfa
"
,
path_list
)
seg_coord
(
args
.
graph
.
name
,
path_list
)
args
.
segment_coordinates_path
=
"
seg_coord/
"
args
.
segment_coordinates_path
=
"
seg_coord/
"
#else:
#else:
# path_segcoord=args.segment_coordinates_path
# path_segcoord=args.segment_coordinates_path
...
...
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