corrected the output of the gff for several genomes

Functions_output.py

@@ -27,7 +27,6 @@ def target_gff(first_seg,last_seg,feature_id,list_seg,max_diff):
 def transfer_on_target(pos_seg, gfa, out_once, out_var,out_clustal,target_genomes,max_diff):
 
     [once,var,clustal,stats]=[True,True,True,False]
-    get_segments_positions_on_genome(pos_seg)
     list_feature_to_transfer= Features.keys()
 
     if var:
@@ -35,11 +34,13 @@ def transfer_on_target(pos_seg, gfa, out_once, out_var,out_clustal,target_genome
 
     for genome in target_genomes:
         print(f'generation of {genome} output')
+        get_segments_positions_on_genome(pos_seg)
         segments_list={}
         if var:
             target_genome_path=paths[genome]
 
         if once:
+            print(f'generation of {genome} gff')
             file_out=open(out_once,'w')
             global output_target_gff
             output_target_gff=[0,"",file_out]
@@ -73,6 +74,7 @@ def transfer_on_target(pos_seg, gfa, out_once, out_var,out_clustal,target_genome
             file_out.close()
 
         if var:
+            print(f'generation of {genome} gene variation details')
             seg_seq=get_segments_sequence(gfa,segments_list)
             file_out_var = open(out_var, 'w')
             global output_variations