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Commit 2051d229 authored by nina.marthe_ird.fr's avatar nina.marthe_ird.fr
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adapted readme to the new argument parsing

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......@@ -13,6 +13,7 @@ You can run GrAnnoT via the script main.py with the following arguments :
- annotation file of a genome embedded in the graph
- the name of the source genome, that the annotation file refers to
- optionnaly the names of the target genomes (these names must be included in the walks of the graph). If no name is specified, the annotation will be transfered on all the genomes in the graph.
The other options can be found if you run "main.py -h".
It will output the following files :
......
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