diff --git a/Run_GeVarLi.sh b/Run_GeVarLi.sh index ceb09ff7f005a624c644b0b05fc2fcbb8ae90503..26189c034db0b8abcd63ef50b97e9b4729f90456 100755 --- a/Run_GeVarLi.sh +++ b/Run_GeVarLi.sh @@ -183,8 +183,8 @@ else # If not, create it. ${ylo}Workflow-Core${nc} conda environment will be create, with: > ${red}Snakemake${nc} (workflow manager) - > ${red}Yq${nc}(yaml parser) - > ${red}GraphViz${nc} (drawing graph) + > ${red}Yq${nc} (yaml parser) + > ${red}GraphViz${nc} (drawing graph) " conda env create --file ${workdir}/workflow/envs/workflow-core.yaml > /dev/null 2>&1 fi @@ -374,7 +374,8 @@ for fastq in ${workdir}/resources/reads/*.fastq.gz; do done echo -e " -If you want to keep Illumina ${blue}barcode-ID${nc} and/or Illumina ${blue}line-ID${nc}, please edit ${ylo}Run_GeVarLi.sh${nc} script (l.335). +If you want to keep Illumina ${blue}barcode-ID${nc} and/or Illumina ${blue}line-ID${nc}, +please edit ${ylo}Run_GeVarLi.sh${nc} script (section symlinks, l.370). "