__default__:
    cpus-per-task : 4
    mem-per-cpu : 10G
    partition : long
    output : 'slurm_logs/stdout/{rule}/{wildcards}.o'
    error : 'slurm_logs/error/{rule}/{wildcards}.e'
    job-name : '{rule}.{wildcards}'


rename_protein: 
    cpus-per-task: 1
    partition: fast
    
phobius:
    cpus-per-task: 5
    mem-per-cpu: 10G
    partition: fast

signalP:
    cpus-per-task: 10
    mem-per-cpu: 10G
    partition: fast

targetp:
    cpus-per-task: 10
    mem-per-cpu: 10G
    partition: fast   

predgpi:
    cpus-per-task: 10
    mem-per-cpu: 10G
    partition: fast
    
parse_phobius:
    cpus-per-task: 1
    partition: fast       

parse_signalp:
    cpus-per-task: 1
    partition: fast

parse_targetp:
    cpus-per-task: 1
    partition: fast 
    
parse_predgpi:
    cpus-per-task: 1
    partition: fast   
    
intersect_tools:
    cpus-per-task: 1
    partition: fast  
    
fasta_intersect:
    cpus-per-task: 1
    partition: fast

tmhmm:
    cpus-per-task: 5
    partition: fast

parse_tmhmm:
    cpus-per-task: 1
    partition: fast

tmhmm_fasta:
    cpus-per-task: 1
    partition: fast

wolfpsort:
    cpus-per-task: 10
    mem-per-cpu: 10G
    partition: fast

parse_wolfpsort:
    cpus-per-task: 1
    partition: fast
    
id_tofasta_secreted:
    cpus-per-task: 1
    partition: fast
    
hmmer_pfam:
    cpus-per-task: 8
    mem-per-cpu: 5G
    partition: fast

effectorP:
    cpus-per-task: 10
    mem-per-cpu: 10G
    partition: fast
    
count_effector:
    cpus-per-task: 1
    partition: fast
    
dbcan2:
    cpus-per-task: 2
    partition: fast
    
cazyme_count:
    cpus-per-task: 1
    partition: fast

orthofinder:
    cpus-per-task: 10
    partition: fast
    
orthofinder_parse:
    cpus-per-task: 1
    partition: fast
    
interproscan:
    cpus-per-task: 4
    partition: fast

makeblast_db_phibase:
    cpus-per-task: 1
    partition: fast

phibase:
    cpus-per-task: 1
    partition: fast

parse_hmmer:
    cpus-per-task: 1
    partition: fast