diff --git a/docs/pages/bash/bash-connecting_remote.md b/docs/pages/bash/bash-connecting_remote.md index 37e3e03875c62edac03f3efaba69eed43fc2ecfd..1bb22e5b527b1b6fc521b53fd1ac4ea8b1d83449 100644 --- a/docs/pages/bash/bash-connecting_remote.md +++ b/docs/pages/bash/bash-connecting_remote.md @@ -26,7 +26,7 @@ Open another terminal session to connect to the master node : `bioinfo-master1. ??? example "Click to show the solution" `Prompt is different, bioinfo-master1.ird.fr as a welcome message` -## Transfering files using Filezilla +## Transferring files using Filezilla Download and install FileZilla. @@ -38,35 +38,35 @@ In the FileZilla menu, go to File > Site Manager. Then go through these 5 steps: 1) Click New Site. 2) Add a CUSTOM NAME for this site such as IRD_HPC. -3) Add the HOSTNAME (see table below). +3) Add the HOSTNAME : bioinfo-san.ird.fr. 4) Set the Logon Type to “Normal†and insert your username and password used to connect on the IRD HPC 5) Press the “Connect†button. {: style="height:500px"} -!!! question "Using Filezilla, transfer a file from your computer to the cluster" +!!! question "Using Filezilla, transfer a file from your computer to your /users/formationX" -!!! question "Using Filezilla, transfer a file from the cluster to your computer" +!!! question "Using Filezilla, transfer the file `/share/formation/TP_LINUX/Linux_for_dummiesCOP2024.pdf` from the cluster to your computer" -## Transfering files (scp) +## Transferring files (scp) !!! question "Using `scp`, transfer a file from your computer to the cluster into the `/users/formationX` directory of the `formationX` account" ??? example "Click to show the solution" - `scp -r /users/<userName>/filename formationX@bioinfo-san.ird.fr:/home/formationX` + `scp -r /home/<userName>/filename formationX@bioinfo-san.ird.fr:/users/formationX` !!! question "Using `scp`, transfer the file `/share/formation/HPC_french.pdf` from the cluster to your computer in your home directory" ??? example "Click to show the solution" - `scp -r formationX@bioinfo-san.ird.fr:/share/formation/HPC_french.pdf /users/<userName>` + `scp -r formationX@bioinfo-san.ird.fr:/share/formation/HPC_french.pdf /home/<userName>` -## Retrieving data from a remote server (wget) +## Retrieving data from a website (wget) -From the IRD HPC cluster, we will get new datasets for the following exercises. -For doing that, we can use the `wget` command to automatically download a zipped file (containing these new datasets) available from a URL. -!!! question "Using `wget` command, download the new datasets available at this address: `http://itrop.ird.fr/LINUX-TP/LINUX-TP.tar.gz` in your `/users/formationX/folder`" + We can use the `wget` command to automatically download a zipped file (containing these new datasets) available from a URL. + +!!! question " On your computer,using `wget` command, download the new datasets available at this address: `http://itrop.ird.fr/LINUX-TP/LINUX-TP.tar.gz` in your `/users/formationX/folder`" ??? example "Click to show the solution" `wget http://itrop.ird.fr/LINUX-TP/LINUX-TP.tar.gz`