Ghana-Installation-software.md

@@ -705,3 +705,35 @@ Add this variable to the path :
            velvetg + arguments
            or velveth + arguments
 
+# RepeatMasker:
+
+Description: RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences
+
+URL: http://www.repeatmasker.org/RMDownload.html
+
+
+### Installation:
+
+             wget   http://www.repeatmasker.org/RepeatMasker-open-4-0-8.tar.gz
+             tar xvfz RepeatMasker-open-4.0.8.tar.gz -C /usr/local
+             cd /usr/local/RepeatMasker-open-4.0.8
+             wget https://www.girinst.org/server/RepBase/protected/repeatmaskerlibraries/RepBaseRepeatMaskerEdition-20181026.tar.gz 
+             tar xvfz RepBaseRepeatMaskerEdition-20181026.tar.gz  
+             perl ./configure
+   
+  
+      
+
+Add this variable to the path :
+
+       echo  'export PATH=/usr/local/bioinfo/RepeatMasker-open-4.0.8:$PATH' >>/etc/profile
+       
+
+       source /etc/profile
+
+
+### Usage:
+            
+           
+           
+