Ghana-Installation-software.md

@@ -815,7 +815,38 @@ Add this variable to the path :
 ### Usage:
             
        Check the binaries available in /usr/local/bioinfo/wise2.4.1/bin    
-       Launch  tools +  arguments     
+       Launch  tools +  arguments 
+    
 
+# Clustal-omega:
+
+Description:  It offers a significant increase in scalability over previous versions, allowing hundreds of thousands of sequences to be aligned in only a few hours. It will also make use of multiple processors, where present. In addition, the quality of alignments is superior to previous versions, as measured by a range of popular benchmarks.
+
+
+URL: http://www.clustal.org/omega/
+
+
+### Installation:
+
+             wget http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz
+             tar xvfz clustal-omega-1.2.4.tar.gz
+             cd clustal-omega-1.2.4
+             ./configure --prefix=/usr/local/bioinfo/clustal-omega-1.2.4
+             make
+             make install
+  
+      
+
+Add this variable to the path :
+
+       echo  'export PATH=/usr/local/bioinfo/clustal-omega-1.2.4/bin:$PATH' >>/etc/profile
+       
+       source /etc/profile
+
+
+### Usage:
+            
+           
+      clustalo +  arguments