Ghana-Installation-software.md

@@ -818,4 +818,35 @@ Add this variable to the path :
        Launch  tools +  arguments 
     
 
+# Clustal-omega:
+
+Description:  It offers a significant increase in scalability over previous versions, allowing hundreds of thousands of sequences to be aligned in only a few hours. It will also make use of multiple processors, where present. In addition, the quality of alignments is superior to previous versions, as measured by a range of popular benchmarks.
+
+
+URL: http://www.clustal.org/omega/
+
+
+### Installation:
+
+             wget http://www.clustal.org/omega/clustal-omega-1.2.4.tar.gz
+             tar xvfz clustal-omega-1.2.4.tar.gz
+             cd clustal-omega-1.2.4
+             ./configure --prefix=/usr/local/bioinfo/clustal-omega-1.2.4
+             make
+             make install
+  
+      
+
+Add this variable to the path :
+
+       echo  'export PATH=/usr/local/bioinfo/clustal-omega-1.2.4/bin:$PATH' >>/etc/profile
+       
+       source /etc/profile
+
+
+### Usage:
+            
+           
+      clustalo +  arguments     
+