Update Ghana Installation software authored by ndomassi.tando_ird.fr's avatar ndomassi.tando_ird.fr
......@@ -910,3 +910,39 @@ Add this variable to the path :
Check the binaries in /usr/local/ncbi-blast-2.4.0+/bin/
tools + arguments
# ncbi-tools:
Description: The NCBI ToolBox consists of three major parts:
Data Model - An explicit data model of biological sequences, structures, bibliographic data, and associated annotations.
Data Encoding - A formal specification and encoding rules. The telecommunications standard, ASN.1, has been used for this. Recently it has been mapped to a similar language, XML.
Programming Libraries - Originally written in a portable dialect of C. Recently a new generation is being written in C++.
URL: ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/
### Installation:
yum install tcsh
cd /usr/local/bioinfo
wget ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/old/20170106/ncbi.tar.gz
tar xvfz ncbi.tar.gz
./ncbi/make/makedis.csh 2>&1 | tee out.makedis.txt
mkdir /usr/local/ncbi-tools-20170106
cp -r ncbi/build/* /usr/local/ncbi-tools-20170106
Add this variable to the path :
echo 'export PATH=/usr/local/bioinfo/ncbi-tools-20170106/:$PATH' >>/etc/profile
source /etc/profile
### Usage:
Check the binaries in /usr/local/bioinfo/ncbi-tools-20170106/
tools + arguments