From c9940f56cb9b68fd597b5c27e7ef4d5c185c6aa3 Mon Sep 17 00:00:00 2001
From: christine <christine.tranchant@ird.fr>
Date: Sat, 6 Jan 2024 20:05:26 +0100
Subject: [PATCH] integrating group stats
---
frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py | 2 --
1 file changed, 2 deletions(-)
diff --git a/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py b/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py
index d802b29..92777a5 100644
--- a/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py
+++ b/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py
@@ -13,8 +13,6 @@ jb_output = snakemake.output.jb_file
# TODO26/11 : use class snakecdysis
dico = {
"group_file": snakemake.params.group_file,
- "ref_file": frangipane_obj.path_reference_dir,
- "out_dir": frangipane_obj.path_output,
"ref_png" : snakemake.input.ref_png,
"ref_csv" : snakemake.input.ref_csv,
}
--
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