diff --git a/frangiPANe/snakefiles/merge_flagstat.smk b/frangiPANe/snakefiles/merge_flagstat.smk index 428d506251bc3d6395c5c3be6bb33ca83f389e28..8c4d82e6d23b4f63a15dca3472ddd529bf833290 100644 --- a/frangiPANe/snakefiles/merge_flagstat.smk +++ b/frangiPANe/snakefiles/merge_flagstat.smk @@ -2,7 +2,7 @@ rule merge_flagstat: input: stat_files= expand(rules.samtools_flagstat.output.stat_file, sample_name=SAMPLES, ref_name=REF) output: - stat_file = f"{frangipane_obj.path_stat_sum}/01_all_flagstat-stats-ref_nam.csv" + stat_file = f"{frangipane_obj.path_stat_sum}/01_all_flagstat-stats-ref_bam.csv" log: output = f"{frangipane_obj.path_logs}/report/merging_flagstat.o", error = f"{frangipane_obj.path_logs}/report/merging_flagstat.e"