diff --git a/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py b/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py index 7510203652cbdfb3bf50f97abfdb71d75e44b28e..138a8ad1f1478b1965f95b719a351c001f2ae5e2 100644 --- a/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py +++ b/frangiPANe/snakemake_scripts/generate_jb_frangiPANe.py @@ -29,11 +29,10 @@ for variable_name, variable_value in dico.items(): code_cell += f"{variable_name} = '{variable_value}'\n" nb.cells.insert(0, new_code_cell(code_cell)) +nb.cells.append(nbformat.new_code_cell("import matplotlib.pyplot as plt")) +nb.cells.append(nbformat.new_code_cell(f"plt.imshow(plt.imread('{dico{'bam_png'}}'))")) # Enregistrer le notebook modifié with open(jb_output, "w", encoding="utf-8") as notebook_file: nbformat.write(nb, notebook_file) - - -