Requirements
Docker : https://docs.docker.com/get-docker/
Python3 (v3.9.7) : https://www.python.org/
biopython : https://biopython.org/
panel : https://panel.holoviz.org/
abyss : https://github.com/bcgsc/abyss/blob/master/README.md
bwa (v. 0.7.17) : https://github.com/lh3/bwa/blob/master/README.md
ea-utils (fastq-stats, v 1.01) : https://expressionanalysis.github.io/ea-utils/
samtools (v1.10) : http://www.htslib.org/
assembly-stats : https://github.com/sanger-pathogens/assembly-stats
cd-hit : https://github.com/weizhongli/cdhit/blob/master/README