From a9b29b1b63314de731fd2b6a91762005e41da31b Mon Sep 17 00:00:00 2001
From: NMarthe <nina.marthe@ird.fr>
Date: Tue, 9 Jan 2024 15:27:06 +0100
Subject: [PATCH] corrected the end coordinates in the output bed file
---
getSegmentsCoordinates.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/getSegmentsCoordinates.py b/getSegmentsCoordinates.py
index 3eccffa..dbd5695 100644
--- a/getSegmentsCoordinates.py
+++ b/getSegmentsCoordinates.py
@@ -84,7 +84,7 @@ for line in lines :
seg_start=position
seg_name='s'+path[i][1:]
- seg_stop=position+segments_size[seg_name]-1
+ seg_stop=position+segments_size[seg_name]
if path[i][0:1]=='>':
orientation='+'
--
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