From 84560ad2242a13b63a8569a693da5098ece0e7b8 Mon Sep 17 00:00:00 2001
From: NMarthe <nina.marthe34@gmail.com>
Date: Fri, 21 Apr 2023 15:45:56 +0200
Subject: [PATCH] =?UTF-8?q?modifi=C3=A9=20le=20format=20du=20bed=20de=20so?=
=?UTF-8?q?rtie?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
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---
seg_coord/getSegmentsCoordinates.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/seg_coord/getSegmentsCoordinates.py b/seg_coord/getSegmentsCoordinates.py
index f773252..e09b38c 100644
--- a/seg_coord/getSegmentsCoordinates.py
+++ b/seg_coord/getSegmentsCoordinates.py
@@ -72,7 +72,7 @@ for line in lines :
else:
orientation='.'
- out_line=chr+'\t'+str(seg_start)+'\t'+str(seg_stop)+'\t'+orientation+'\t'+seg_name+'\n'
+ out_line=chr+'\t'+str(seg_start)+'\t'+str(seg_stop)+'\t'+path[i][0:1]+seg_name+'\n'
out_bed.write(out_line)
position+=segments_size[seg_name]
--
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