From 7a173cafdeb74a8430cce5039c78d48e8f6fcfe2 Mon Sep 17 00:00:00 2001
From: NMarthe <nina.marthe@ird.fr>
Date: Thu, 7 Dec 2023 09:52:04 +0100
Subject: [PATCH] updated readme

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 README.md | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/README.md b/README.md
index 911fc13..64d324b 100644
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 GrAnnoT is an annotation transfer tool for pangenome graphs. It can transfer genome annotations to a pangenome graph containing the genome, and also transfer the pangenome graph's annotations on the genomes it contains. 
 This project is young and in development, some errors will be corrected, improvements will be made and new features will appear in the near future.
 
-## Usage
-
+## Usage
 GrAnnoT requires the graph to be in GFA format with W-lines that describe the walks of the input genomes. For example minigraph-cactus gives that kind of output. 
 
 You first need to extract from the GFA the positions of the segments of the graph on the genomes it contains. For this you need to run the script getSegmentsCoordinates.py with the GFA file as input. 
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GitLab